LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1266g00008	ATGGTAAAGTCCCAATCGCGTGTACCCCACGTCAACTCCCACCGAAACAGCAACACAAGGCCCTCTTATTCTGTGCTCAGGCTCATCGTACAACCTCATCTTTCGCCGTTCATTACATCTCCCACTTTCTTCCAATTTCGACGGTCCAGATCTTCTCGCTCAACCTTTCTTACCCACCCACCTATATATAAATATCCTTCATACATTTCTCTTCTTTTTCACTTGCCAAAATCCGAAGAAGCAACAACTGCTAAAGCTCAAGTGTTGATTATCATTTTGTTTACTGGATTGGATCTTATGGATATGAAAGTGGTAGGTAAGTTTCACCTGGGTGCATCTGATTCTGTTTTGCCTAAAAAGATGTGGAGATTTAAGCCATTCATGCACAAAGAGCAGACTGGTCTTGAAGGACGCACTGTAGATGTTGGCAATCTTAAAATAAATGTCCTTAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACCTAGCACGTGATGCTGTGCATATGTCAAAGCAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTGGTAAAGAAGGAGATATCTGTGATGAAGATGCTGGCAGGACATCCTAATGTTGTCACACTTCTTGCACATACTATCTTTGATATGGGTAGGACTAAAGAGGCATTTCTTGTTATGGAATTTTGTGAGAGGTCTCTGGTTAGTGTGCTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAAACAGGTTCTTTTGATCTTCAGGGATATCTGTAATGCAGTTTTTGCCATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTCCAGATGGCATATGGAAGTTATGTGATTTTGGAAGCACTTCCACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGGATTGAAGAAGACAATATCAGGAAGTACACAACCCCTGCCTACCGGGCGCCCGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAGGTGGACATATGGGCACTTGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCTTTTGATGGGGAATCGAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGAGTTACCCAAATACAATTCATCTGTCACGGACTTGATAAGGGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCATCTCCATCAGTTTAGGTGTTTCAAACAAATCATCTCCAATGCCCCGTAGGAACCCACCTCCTCCACCTTCATCTGGAGATCCCAAAACTACATCACAGCCATCCCTTGCTTCTAGGGGTGGGGGAAATGGAGGGCAGCTGGGTGCTTTCTGGTCCACTCAGCATGCACAGGATTCACATGTCGCTGAGGATAAGAGCAAACCAATTTTTGATGAAGAACCATCTAGCCACCATATGTCCTTGAAAAATGATAGAATTCGTCCTGAAAACGATCAATTACCAAAAAATGTTAGTACTAACAAAGTGGTTAACACACAAACTCATACTGTGAAAAGCAGTACACATGGAAAGGATAAAGATCATGTGGGTGAGAAGCAAATGTCTAGTATGGAGAATACTAACTTTCAAAACCAGGCTTTCAACACTTTTGTTGCAGAATTCGATACCACTAAGCTCAGCTCTGGACTTAATAACAAATCCGAAAGGCAACAAGCATTAGAGGCTGAGGTGGAGAAACTCAAAGAGAAGCTGAAGGAAGCTAACTTGGAAAAAGCTGAAATAACTTCAAAGTATGAAAAGCTTTCTGCTATCTGCCGATCACAGAGGCAAGAGTTGCAGGATCTAAAGCAAGCACTAGCAGCTCGAACTCCTTCACCAAGTAGAGAGGGTTTGAAAACCTCTCCTGCAGTTACATCATCTGCATCTGTGTCATGGCAAGCTTTTCCAGAGGAACCCCAACAACAAAAGTCCTTTTCAGCGGAAAATACTTCCAAATCTGCCAGGACAAAAAATGGTCAGCAGAACAAGCAACCTCAACCTGTTCCACTAGCTACTAATTTTGATTCATGGGGTTTTGGAACAGATAGCTTCAGTGCTGTACCTTCTGGCAGCCAACAGAAGCAAAGAGCCAGTAGTGAAGGGAAGTCTCAGGCTTTTGGTGAGGCAAAGGCCTTTGAGAGTAAGCCAGCTTCTCAACCAGCTGGATGGGCTGGATCTATACTGTGTGACTGCTCCGAGACATATTTTTTGGTCCCACATGGAGAAGTATTAATGAATGCAGAACTCGTTATATATCCT	2328	0.4343	MVKSQSRVPHVNSHRNSNTRPSYSVLRLIVQPHLSPFITSPTFFQFRRSRSSRSTFLTHPPIYKYPSYISLLFHLPKSEEATTAKAQVLIIILFTGLDLMDMKVVGKFHLGASDSVLPKKMWRFKPFMHKEQTGLEGRTVDVGNLKINVLKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLELVKKEISVMKMLAGHPNVVTLLAHTIFDMGRTKEAFLVMEFCERSLVSVLESRGAGYFDEKQVLLIFRDICNAVFAMHCQSPPIAHRDLKAENLLLGPDGIWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPELPKYNSSVTDLIRDMLQARPDDRPDITQASALLDWPFISISLGVSNKSSPMPRRNPPPPPSSGDPKTTSQPSLASRGGGNGGQLGAFWSTQHAQDSHVAEDKSKPIFDEEPSSHHMSLKNDRIRPENDQLPKNVSTNKVVNTQTHTVKSSTHGKDKDHVGEKQMSSMENTNFQNQAFNTFVAEFDTTKLSSGLNNKSERQQALEAEVEKLKEKLKEANLEKAEITSKYEKLSAICRSQRQELQDLKQALAARTPSPSREGLKTSPAVTSSASVSWQAFPEEPQQQKSFSAENTSKSARTKNGQQNKQPQPVPLATNFDSWGFGTDSFSAVPSGSQQKQRASSEGKSQAFGEAKAFESKPASQPAGWAGSILCDCSETYFLVPHGEVLMNAELVIYP	776

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr1266g00008	776	CDD	STKc_GAK_like	146	408	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	426	466	-	-
	Mupr1266g00008	776	PANTHER	SERINE/THREONINE PROTEIN KINASE	121	732	-	-
	Mupr1266g00008	776	ProSiteProfiles	Protein kinase domain profile.	147	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1266g00008	776	Gene3D	Transferase(Phosphotransferase) domain 1	130	419	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	658	695	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	431	445	-	-
	Mupr1266g00008	776	FunFam	probable serine/threonine-protein kinase DDB_G0280111	130	424	-	-
	Mupr1266g00008	776	SUPERFAMILY	Protein kinase-like (PK-like)	148	440	IPR011009	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	708	725	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	629	648	-	-
	Mupr1266g00008	776	Coils	Coil	573	628	-	-
	Mupr1266g00008	776	SMART	serkin_6	147	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1266g00008	776	Pfam	Protein kinase domain	149	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1266g00008	776	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	272	284	IPR008271	GO:0004672\|GO:0006468
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	486	513	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	486	508	-	-
	Mupr1266g00008	776	MobiDBLite	consensus disorder prediction	708	744	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1266g00008	Mupr-Chr1266	14407	19016	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1266g00008	147	408	MAP Kinase Kinase Kinase	AT5G11850	27.138	9.33e-19	89.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Mupr1266g00008		Pkinase	4.7e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1266g00008	K08853		-	gmx:100808507	989.949