Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12666g00003 ATGGACAAAGCAATCCATTGTGTTATTCTATCCTATCTCATTCTTTCACTCCTTGTGGGTCAAATCTATGGAAATAGACAAGTTGAAGCTCTTAACAATCTGCACAAGTCCAAGTTGAGAGAAAATTCACAAATTGATAGGAGTAGTGAGTTACAGGTAGAGGAGCTTGCTTATGAAGACATTATTCATTCTCAAGAGGGCCTCAAAGAGAAAGATAAAATTGAGAGTCTTCCAGGACAGCCCCTAGTGTCTTTCTCTCAGTATGGAGGGTATGTCACTTTGGATAAATTTGCTGGCCGTGCCTTTTATTATTACTTTGTTGAAGCTCGTCGTTCTAAACAAACACTCCCACTTCTTCTTTGGCTCAATGGAGGCCCCGGATGTTCATCACTTGCCTATGGAGCAATGCAAGAACTTGGACCTTTTCGAGTAAACAGTGACGGCAAAACATTACACACAAATAAATTTTCATGGAACAAAGTTGCAAATGTTTTATTCCTCGAGTCACCTACGGGAGTAGGATTTTCCTATTCAAACAAATCAAAAGATTACGATACGAATGGAGATAGGAAAACAGCTGCAGATAATTATTTATTCTTGGTGAATTGGTTGGAGAGATTTCCAGAATATAAGGACAGAGATTTCTTTATTGCTGGGGAGAGCTATGCTGGGCATTATGTGCCTCAACTTGCACATACCATTCTTTATCATAACAAAAAGGCTAAGACAATCATCAACCTCAAAGGAATCTTGATTGGGAATGCAGTGATCAACGATGGAACTGACTTGCTAGGAATGTATGATTATCTTGCTAGCCATGCAATCATCTCAGACAAAGCAGCTTATATAGATAAAGCTTGTGATTTATCATCGAAGAATCAGAGTGAGTGCGATGCAGCCAGTGCTGAAATTGAAAAGGATCTTGAATACATTGATTTATACAATATTTATGCTCCATTATGCAAGAATACCAATCTCACGGCCCTGCCCAAAAAGAGCTCCATTGTCACTGATCCATGTAGTGATTATTATGTGTATTCATATCTTAATAGAAAGGATGTTCAAGAGGCTCTCCATGCCAATGTCACCAACCTCAAATATGACTGGGAACCCTGCAGCGATGTCATTACAAAGTGGGTTGATAGCTCTACAACAGTTCTTCCACTTTTACATGAATTCCTTAACAATAGCCTCAGGGTTTGGATTTTCAGTGGTGACACAGATGGAAGGGTGCCTATTACTTCAACCAAATATTCAGTTAACAAGATGAACCTTCCCATTGAAACTGTATGGCACCCTTGGTTTGCCTATGGAGAGGTTGGTGGCTATGCAGAAGTATACAAGGGAGGCCTAACTTTTGCCACTGTGAGAGAAGCAGGGCATCAAGTGCCAAGCTACCAGCCAGCAAGGGCACTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCTGGTCCTCCCAAAAGAAATGCCTAG 1479 0.405 MDKAIHCVILSYLILSLLVGQIYGNRQVEALNNLHKSKLRENSQIDRSSELQVEELAYEDIIHSQEGLKEKDKIESLPGQPLVSFSQYGGYVTLDKFAGRAFYYYFVEARRSKQTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHTNKFSWNKVANVLFLESPTGVGFSYSNKSKDYDTNGDRKTAADNYLFLVNWLERFPEYKDRDFFIAGESYAGHYVPQLAHTILYHNKKAKTIINLKGILIGNAVINDGTDLLGMYDYLASHAIISDKAAYIDKACDLSSKNQSECDAASAEIEKDLEYIDLYNIYAPLCKNTNLTALPKKSSIVTDPCSDYYVYSYLNRKDVQEALHANVTNLKYDWEPCSDVITKWVDSSTTVLPLLHEFLNNSLRVWIFSGDTDGRVPITSTKYSVNKMNLPIETVWHPWFAYGEVGGYAEVYKGGLTFATVREAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRNA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12666g00003 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Mupr12666g00003 492 Gene3D alpha/beta hydrolase 68 323 IPR029058 -
Mupr12666g00003 492 Gene3D - 340 377 - -
Mupr12666g00003 492 FunFam Carboxypeptidase 386 481 - -
Mupr12666g00003 492 FunFam Carboxypeptidase 68 323 - -
Mupr12666g00003 492 Pfam Serine carboxypeptidase 79 480 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 468 IPR001563 GO:0004185|GO:0006508
Mupr12666g00003 492 SUPERFAMILY alpha/beta-Hydrolases 66 486 IPR029058 -
Mupr12666g00003 492 Gene3D - 386 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12666g00003 Mupr-Chr12666 12962 17806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12666g00003 348 484 Calmodulin-binding Proteins AT2G22960 29.197 2.57e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12666g00003 K16297 - gmx:100783864 841.647