Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12662g00002 ATGGCCGATCAGCCACAAGAGGGTGGTGATGAAGCCACTTCTAGAGTGATTAATAAATGTATAGGTAAGGGCACAGACAAAAAGTGTGCTAAGTCAAGAGCATCAACACCTCCATGTGGGGCTTGCAAGTATATGAAGAGGAAATGTTGCGTTCAGTGCGTTTTTGCACCCTACTTTGCATCTGACCAGGGTTTAGAACAATTTGCAATAGTGCACAAGGTGTTTGGCGCAAATAATGTGTCAAAAATGTTGTCGAATGTCGCACTGGACCAACGCCACCAAATGGTTGTTTCCTTATTGTATGAGGCTCGGGCAAGGCTAGCTGATCCAATTTATGGTTGTCTCTCCACCATTGTTTCTTTTCAGCAGCAGGTGGCATCGTTGCAAAGGGAGCTTCTTATGAGGCAAAATCAACTGATAAATAGTAGGACTTCATATGCAACTCTTCATCAGAGCACACAACAACAAGCAAACAATAATGTAGCTATGCAGCCAGCATACTCCAACAATTCACCCATTCCAACCAACTTGATGAGCTTCATCAACCCTGGTTTTGATCACCTTGCAATGCAAACAGCATCCTCATCACACAGCTTGGAGCCTCTTCAAGTCTCTGGCCTACCTCAAAATGAGGAAGAAAGCAAAATTCCCCAAGTTCTCAACAATGGCATGGCCCATCTCATTCCATGA 690 0.442 MADQPQEGGDEATSRVINKCIGKGTDKKCAKSRASTPPCGACKYMKRKCCVQCVFAPYFASDQGLEQFAIVHKVFGANNVSKMLSNVALDQRHQMVVSLLYEARARLADPIYGCLSTIVSFQQQVASLQRELLMRQNQLINSRTSYATLHQSTQQQANNNVAMQPAYSNNSPIPTNLMSFINPGFDHLAMQTASSSHSLEPLQVSGLPQNEEESKIPQVLNNGMAHLIP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12662g00002 229 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Mupr12662g00002 229 PANTHER LOB DOMAIN CONTAINING PROTEIN 35 178 - -
Mupr12662g00002 229 MobiDBLite consensus disorder prediction 208 229 - -
Mupr12662g00002 229 ProSiteProfiles LOB domain profile. 37 139 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12662g00002 Mupr-Chr12662 6842 9942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12662g00002 38 215 AS2 family AT3G03760 48.205 7.86e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr12662g00002 LOB 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12662g00002 - - qsa:O6P43_006215 219.55