Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12652g00001 ATGGAAACACAACAAAGGGGTGGTGAAACTGTGCTAAACCTTTTGAGGGTCCTTTTTCTCTCTCTCTCTTTCTCCTGGTTTGAGTTTCATTGTACTTTGATTTCACTGCACAAGGAAGTACATGAGACTCTTCCAAAAGGGGATGAATTGAAGGCCAGAAGCTGTTTAGAGGAGAGAGATTTTTTTTTCCAAGACATGGCTATGTTTGATCTCAATGTTGACATCAACCATGCTGAAGCTGATGCTGACTCAAGCTGTGCTCAAAAGGGGGTGCAAGTGCAACTGCAAAGTTTTCCACCTGAAATCTCAGATTCCAGGACCTCCAACTCCTCTGTGTGGAATCCTGCAGAAGAAGATTCCTCAAACAATTACTCCCCCTTTATTTTTGGCATACTGAAGAAAGAGAGAGGTGGCTCAGGCTCAGAGTTTTATGCTTCCACTGAAAGGGACAATAATAAGGAGCAAAACATGACGCAGGAGGCAGAGATAGTGACAAGGACCCTTTTCCCTGTGACTGTTGCTGACAGAGGAGGTAGAGTGCCTGATTTCAAATTGGGGTTGTGGGGGAACACTCAATGGCTGAACCTGTCCTTTCCAGAAACTGATGGACAAAATGGCCAGAAAACCTTGCAGCAGAAGCTACCTCATGTCAAGAAAAATAGGAGAGGGCCAAGGTCTCGTAGCTCTCAGTACCGGGGTGTCACCTTCTATCGTAGGACCGGTAGATGGGAGTCACATATTTGGGATTGTGGGAAGCAGGTCTATTTGGGTGGATTTGACACTGCTCAAGCTGCTGCAAGAGCATATGATAGAGCTGCTATTAAGTTTCGGGGAGTAGATGCTGATATAAACTTTAGCTTGAGTGATTATGAGGAAGATTTGAAGCAGATGAGAGGTTTGAGCAAGGAAGAGTTTGTGCTCTTACTTCGTAGACAAATCAATGGAATCTCGAGGAGAAGTTCAACATACAAAGGTGTATTAGCTCTTCACAAAGATGGTCAAGGAGAGCCACGAATGGGACCATTTCTTGACAAGACATTTTATCCAAAGTCATCCATCAAGTGTGATGATGGAAAAGTGGAGGCCAATTTTAAGCCCTGTTTCTATAAGGAAGAAATAATTGCAAATTCCAGCATGGCAGGCACTTGCTATAATCTTGATTTGAGCCTAGGGATTTTTCCATCTTCTAAAAAATTGAAGAATAATGATTATGGAGGAGGGTTTTCCTTTGGATGTATGGCTTGTAAGATACCCGAGGAAAGAGGAATAATGGAGAAGGCCATGGTAGACAGAATAAGAAATGTTCCTTTGCAAACATTTTCCAACATGGCTTGGCAAATTTGCAGCAATGGCAGCATTGCCTCAAGGCCATTGCAATCAAATGCAGCATCATCAGGATTCGTCTCTTCATCTAGCTGTCTCATCAAGCACACTTCCAATCAGCACACATATTAA 1455 0.4316 METQQRGGETVLNLLRVLFLSLSFSWFEFHCTLISLHKEVHETLPKGDELKARSCLEERDFFFQDMAMFDLNVDINHAEADADSSCAQKGVQVQLQSFPPEISDSRTSNSSVWNPAEEDSSNNYSPFIFGILKKERGGSGSEFYASTERDNNKEQNMTQEAEIVTRTLFPVTVADRGGRVPDFKLGLWGNTQWLNLSFPETDGQNGQKTLQQKLPHVKKNRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRGVDADINFSLSDYEEDLKQMRGLSKEEFVLLLRRQINGISRRSSTYKGVLALHKDGQGEPRMGPFLDKTFYPKSSIKCDDGKVEANFKPCFYKEEIIANSSMAGTCYNLDLSLGIFPSSKKLKNNDYGGGFSFGCMACKIPEERGIMEKAMVDRIRNVPLQTFSNMAWQICSNGSIASRPLQSNAASSGFVSSSSCLIKHTSNQHTY 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12652g00001 484 Gene3D AP2/ERF domain 229 288 IPR036955 GO:0003700|GO:0006355
Mupr12652g00001 484 MobiDBLite consensus disorder prediction 99 119 - -
Mupr12652g00001 484 MobiDBLite consensus disorder prediction 201 230 - -
Mupr12652g00001 484 ProSiteProfiles AP2/ERF domain profile. 230 286 IPR001471 GO:0003700|GO:0006355
Mupr12652g00001 484 Pfam AP2 domain 230 278 IPR001471 GO:0003700|GO:0006355
Mupr12652g00001 484 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 166 395 - -
Mupr12652g00001 484 SMART rav1_2 230 292 IPR001471 GO:0003700|GO:0006355
Mupr12652g00001 484 SUPERFAMILY DNA-binding domain 229 287 IPR016177 GO:0003677
Mupr12652g00001 484 FunFam AP2-like ethylene-responsive transcription factor 229 288 - -
Mupr12652g00001 484 CDD AP2 229 285 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12652g00001 Mupr-Chr12652 283 5045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12652g00001 163 397 AP2-EREBP Transcription Factor Family AT4G36920 51.527 1.50e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr12652g00001 AP2 3.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12652g00001 K09284 - gmx:100776138 668.692