Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12645g00001 ATGGAGCAACAGCCGCACAGCGCCGCCGCATACGACGACGCAGCCACCACAAGCTCCGCCGAAAAGCCCGCCACACCGCGCGGAGGCACGCGCCACCCTCTCTTCCGCGGCGTCCGCAAGCGCCGCTGGGGCAAATGGGTCTCCGAAATTCGAGAGCCGCGCAAGAAGTCGCGTATATGGCTCGGCTCCTTCCCGGCGCCGGAGATGGCCGCCAAGGCCTACGACGTCGCCGCCTACTGCCTCAAGGGCCGCAAGGCGCAGCTCAATTTCCCCGACGAGGTCCACCGCCTCCCGCCGCTCCCGCCGCCGTCCTCTTGCACCGCCCGCGACATCCAGGCCGCCGCCGCCAAGGCCGCCCACATGGTCATGTCCACGGCCGCCGCCTCGCCGGAGAAGACCAGCATTTCCTCCGACGCCGACGCCGACGACTTCTGGCGCGATATTGAGCTCCCGGAACTCCTCAACGGCAAGTGGTGGACCTCCTCCGCTGACGCCACGCCGTGGCCGGAGCCGGAGCTCCCGCCGCAGCAACCCTTCACGACGGCGTGCTTGTAG 555 0.6955 MEQQPHSAAAYDDAATTSSAEKPATPRGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMVMSTAAASPEKTSISSDADADDFWRDIELPELLNGKWWTSSADATPWPEPELPPQQPFTTACL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12645g00001 184 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Mupr12645g00001 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 153 - -
Mupr12645g00001 184 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 MobiDBLite consensus disorder prediction 161 184 - -
Mupr12645g00001 184 MobiDBLite consensus disorder prediction 1 34 - -
Mupr12645g00001 184 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Mupr12645g00001 184 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 CDD AP2 33 92 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Mupr12645g00001 184 MobiDBLite consensus disorder prediction 1 24 - -
Mupr12645g00001 184 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12645g00001 Mupr-Chr12645 3102 3656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12645g00001 30 184 AP2-EREBP Transcription Factor Family AT1G01250 60.248 2.70e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr12645g00001 AP2 7.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12645g00001 K09286 - gmx:100806544 270.781