Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12622g00003 ATTAACTTTCACCTATTAATACCGCTCAATCATTTCCTTATTCTACACACACTTCTTTACCCGCGCATCTTCAATATACAACCCTCAAACTTTCATACCTCTGTTGAACTTGCTATTGCTATGGCTGACATAGATCGTTCCTCTGATAATGTTTCTGCTGATTCTACAGAGAAATCCAGCCAAGTCTCAAATGTGGAATTTTCTGAAGCTGAGGAAATCCTTATTGGCATGGTGTATAATCTGGTTGGGGAGAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACTCCAGAAGAAATAGAGAAGTATTGGACTTCAAGATCCTCGACTAGCCAATGA 342 0.4006 INFHLLIPLNHFLILHTLLYPRIFNIQPSNFHTSVELAIAMADIDRSSDNVSADSTEKSSQVSNVEFSEAEEILIGMVYNLVGERWSLIAGRIPGRTPEEIEKYWTSRSSTSQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12622g00003 113 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 62 109 - -
Mupr12622g00003 113 Pfam Myb-like DNA-binding domain 66 106 IPR001005 -
Mupr12622g00003 113 SUPERFAMILY Homeodomain-like 65 107 IPR009057 -
Mupr12622g00003 113 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Mupr12622g00003 113 SMART sant 63 111 IPR001005 -
Mupr12622g00003 113 CDD SANT 66 105 IPR001005 -
Mupr12622g00003 113 Gene3D - 66 108 - -
Mupr12622g00003 113 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 113 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12622g00003 Mupr-Chr12622 13946 15169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12622g00003 59 110 MYB Transcription Factor Family AT5G14750 46.154 6.30e-11 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12622g00003 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12622g00003 - - var:108340066 150.984