Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12613g00002 ATGTTAGTCGGCAGTAGCAAAAGCAGCACAATACTTGGACAATCATCATGTTCATGTCCAGCCAGAATGGTTAAGGTTTCAGCCGAGTCTGCTTTAGCACCTGTTAACAAAAATGATGTTTTTATCAGTTTTAGAGGTGACACGCGCAACAACTTCACAAGCCATCTTTATGCAGCTTTTCAGCACAACAAGATCCAAGTGTTCATAGATAACAGGCTTCACAAGGGGGATCAGATATCACTCTCACTTTTCAAAGCCATCAAACACTCCAACCTATCTGTGGTTGTTCTCTCCAAAGACTACGCTTCCTCCACTTGGTGCCTGCGTGAACTCCACAAGATACTCCAACACAAAGAACGTAGTGGACACATTGTGATACCAGTGTTCTATAAGATTGACCCTTCCCACGTAAGGAAGCAGACAGGCACTTATGGGAAAGCGTTTGAAAAATATGAGAAAGATGTTATATACAACATGGCCTTGTTGCAGAAATGGAAAAATGCTCTCACTCAAGTTGCCAATTTAGTTGGGTGGGAATCACGGAATTATAGGACGGAACGTGAACTCATTGAGGAAATTGTAAAAGATGTTATTCAAAAACTGAATCATATACATCCCACTGATGTAAAAGAAGCACTTGTTGGAATTGATCAAAATCTTGCTCCTATTGAATCATTATTGAGGATCAGGTCAAGAGAAGTTCGCATAATTGGAATTTGGGGCATGGGTGGACTAGGTAAGACAACCATTGCCAATGCTTTATTTGCCAAATTATCATCTCAGTATGAAGGTAGTTGCTTCTTGGCAAATGTAAGGGAAGAATTTGAAAAGCAAGGACTTGGTTATTTGCGTAATAAACTTCTTTCCGAGTTACTAGAGGATGTGAATCTCCATATCAGTACCCCTAGAGTAAGATCCACTTTTGTTACAAGGAGGCTTAGAGAAAAAAAGGTTTTGATAGTGCTTGATGATGTGGACAATCCAGAGAAACTAGAATGTCTTGCTGCACAACATGGTTGCTTGGGATCTGGTAGTAGAGTCATTGTCACTACCAGAGACAAGCATGTCCTTAGCAAAGGGGTAGATGAAATATATGAGGTCAAGGGATTGTCCCTTCATCATGCTGTTAGGCTTTTTAGTTTAAATGCCTTCGGGAAAAACTATCCTGAAATGGGCTTTGAAATGCTATCTAAACAGGTGGTTGATCATGTAAATGGCAATCCATTGGCTTTAAAAGTTTTAGGTTCAGTTCTCCATTCCAGAAATGAGCAGCAATGGGACAGTGCTCTGAGAAAACTCATGAAGGTTCCTAATGCAGAAATTCATAATGTGTTAAGATGGAGTTATGATGGATTAGATGATGATGAAAAAAATATGTTCCTGGACATTGCATGCTTCTTCCGAGGAGAGAATAAAGAAAATGTTATAAGGCTACTAGACATTTGTGGTTTCTATGCAGATATTGGTATAGGAGTCCTTCTAGACAAAGGTCTAATAACTTTTTCTGATGGCAATGAAGTGTGTATGCATGACTTGATACAAGAAATGGGCTGGGAAATTGTTCATCAGGAATCTATCAAAGATCCTGGAAGGCGTAGCCGATTGTGGGATCCAGAAGAAGTCTATGATGTATTAAAAAATAACAGGGGAACTGATGCAGTTGAAGGCATAATCTTAGATGTGTCTCAAATAAGAGTCTTGCTCTTGAGCTATGAGAGCTTCTCAAGGATGATCAATATAAGATTTCTCAAATTCTATATGGGGAGGGGTAGGACATGCAATTTGCTCCTTCCTTATGGTCTTGAATCATTGCCTAATAAATTAATGTACCTACAATGGGATGGATACCCTTTCAAGTCCTTGCCATCAACTTTTTGTCCTGACAAACTTGTTGTGCTTTCCATGATGGAAAGCCATGTTGAAAAACTTTGGGATGGAATCAAGAGTCTTGCAAACTTGAAAGAGATCAACCTCCGAGCGTGCAAGAATTTAACTAGTCTCCCAGATTTAACTAAAGCGCCAAATCTTGAAACTGTAGATGTTTCTCACTGCACAAGTCTGCTTTATGTTCCCTTATCCATCCAATATGTCAAGAAGCTTCTTCTGTTTAACTTGGAATCCTGCAAGAGTCTTAAGAGTCTTCCAAGAAACATTCACTTGTCTTCTCTTGCAATGTTCATTCTCCGACGCTGTTCAAGTCTTGATGAGTTTTCAGTGACTTCGGCGAACATGACACGCCTGGACTTAAGAGAAACAGCAATAACAAATTTCCCAGAATCAGTTTGGCAGCATCTGAACAAGCTTGTTTACTTGAATCTGGAATCCTGCACCAAGCTTGAGAGTCTTGCAAGCAACATTCACTTAAAATATCTTCAAAGACTCAATCTTAGAGATTGTTCAAGTCTTGTGGTGTTTTCTGTGACTTCGGAGAACATGGAATACCTGAATTTGAGAGGGACATCAATAAAAGAATTGCCAACATCAGTTTGGTGCAATAACAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAAACTTGTGAATTTTCCTGATAGACCAAAACTTGAGGATTTGCCTCTCAGCTTGAATGTGGTATCCTCCTCTGAAAGGCCGAATATGAATGAACCATGGACTTTGTCATCCTTAGCAGATATATCTCTAAAAGGAAGCAGTATTGAGAATTTACCTGCAAGCATCAAAGATCTTCCTAGTCTGAAAAAGCTTACCTTGACTAAGTGCAAGAAACTTCGGTCTTTACCAAGCCTTCCACCATCCTTGGAAGACTTATCCTTAGATGAAAGTGATATTGAGTGTTTACCTGTAAGTATCAAAGATCTTCCTCACTTGAAAAAACTTACCCTAACTAACTACAAGAAGCTTTTGTCTCCGCAAGATCTTTCTCATCTACAAAAGTTTCCTCTGGTTAAGTGGAAAAGGTTTCATTCTCTACCAGAGCTTCCACCATTCTTGGAAGAATTTTCACTAAGTGAAAGCAAAATTGAGTGCATAGCTGAAAGCATAAAAAATCTTTCTCAACTGAGAAAACTAGCCTTAACAAAGTGCACAAGGCTTCGGTATTTACCCGAGCTTCCACCATCTTTGGAAGATTTGTTTGTAAATGGATGCAACATTGAAAGCTTGCCAATAAGAATCAAAGATCTTATTCATTTGCGAAGGATCACCTTAATCGACTGCAAGAAGCTTCAGGCTCTCCCAGAGCTCCCACCATGCCTGCAATCATTTTGTGCAGCAGACTGCACATCACTTGAGACTGTTCAAAGCTCAAAGACTGTCTTAATAGAAGATAGATATGCATTCTATTACAACTGCATAAACTTGGACCAAAATTCACGCAACAATATCGTTGCAGATGCACCCTTTGAGGCAGCTTATACTTCTTTGCAAGAAGGAACACCTCTTGGTCCTCTCCTTTCTGTTTGTTTGCCAGGAACTGAAATCCCAGACTGGTTCAGCTACCAATCAACAAATTCTTCACTGGACATAGAAATTCCTCCACAGTGGTTCAATGATTCAAAGTTCTTAGGTTTTTCCCTGTGCCTTGTAATTGGTGGTTTCCATCAAAACAGTTATGAGCGGTATGATCCAGATGTCAATTGTTATCACTTTGTGAAGTCTGCCCTTAACTCTGACCCCGGTGTTCCCTTTCTTGGCCATTGCACAACTGTAATGCAGGTGCCAAGAGGTTTTAATTCAGATCATATATTCATGTGCTACTATCCCTCTTTTAATGCCTCCATACTGCAAGATTTCAAGGATTTAGGATTGTACTATGATGCTAACAACTTAAGGCTCAGAGTCATCTTTAAATTTAAGGGTCCATCTCAACGGCTGGACATTGTAAAGAAGTGTGGGGTCAGACCCCTATTGATTGCTAATACTGAAAGGCTTCACATAGAAAGTGAACTACAGCCTGAAGATTCATGA 3945 0.3965 MLVGSSKSSTILGQSSCSCPARMVKVSAESALAPVNKNDVFISFRGDTRNNFTSHLYAAFQHNKIQVFIDNRLHKGDQISLSLFKAIKHSNLSVVVLSKDYASSTWCLRELHKILQHKERSGHIVIPVFYKIDPSHVRKQTGTYGKAFEKYEKDVIYNMALLQKWKNALTQVANLVGWESRNYRTERELIEEIVKDVIQKLNHIHPTDVKEALVGIDQNLAPIESLLRIRSREVRIIGIWGMGGLGKTTIANALFAKLSSQYEGSCFLANVREEFEKQGLGYLRNKLLSELLEDVNLHISTPRVRSTFVTRRLREKKVLIVLDDVDNPEKLECLAAQHGCLGSGSRVIVTTRDKHVLSKGVDEIYEVKGLSLHHAVRLFSLNAFGKNYPEMGFEMLSKQVVDHVNGNPLALKVLGSVLHSRNEQQWDSALRKLMKVPNAEIHNVLRWSYDGLDDDEKNMFLDIACFFRGENKENVIRLLDICGFYADIGIGVLLDKGLITFSDGNEVCMHDLIQEMGWEIVHQESIKDPGRRSRLWDPEEVYDVLKNNRGTDAVEGIILDVSQIRVLLLSYESFSRMINIRFLKFYMGRGRTCNLLLPYGLESLPNKLMYLQWDGYPFKSLPSTFCPDKLVVLSMMESHVEKLWDGIKSLANLKEINLRACKNLTSLPDLTKAPNLETVDVSHCTSLLYVPLSIQYVKKLLLFNLESCKSLKSLPRNIHLSSLAMFILRRCSSLDEFSVTSANMTRLDLRETAITNFPESVWQHLNKLVYLNLESCTKLESLASNIHLKYLQRLNLRDCSSLVVFSVTSENMEYLNLRGTSIKELPTSVWCNNKLFTLVLHSCKKLVNFPDRPKLEDLPLSLNVVSSSERPNMNEPWTLSSLADISLKGSSIENLPASIKDLPSLKKLTLTKCKKLRSLPSLPPSLEDLSLDESDIECLPVSIKDLPHLKKLTLTNYKKLLSPQDLSHLQKFPLVKWKRFHSLPELPPFLEEFSLSESKIECIAESIKNLSQLRKLALTKCTRLRYLPELPPSLEDLFVNGCNIESLPIRIKDLIHLRRITLIDCKKLQALPELPPCLQSFCAADCTSLETVQSSKTVLIEDRYAFYYNCINLDQNSRNNIVADAPFEAAYTSLQEGTPLGPLLSVCLPGTEIPDWFSYQSTNSSLDIEIPPQWFNDSKFLGFSLCLVIGGFHQNSYERYDPDVNCYHFVKSALNSDPGVPFLGHCTTVMQVPRGFNSDHIFMCYYPSFNASILQDFKDLGLYYDANNLRLRVIFKFKGPSQRLDIVKKCGVRPLLIANTERLHIESELQPEDS 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12613g00002 1314 Pfam NB-ARC domain 224 436 IPR002182 GO:0043531
Mupr12613g00002 1314 Pfam TIR domain 39 215 IPR000157 GO:0007165
Mupr12613g00002 1314 Gene3D Ribonuclease Inhibitor 958 1136 IPR032675 -
Mupr12613g00002 1314 Gene3D Ribonuclease Inhibitor 741 956 IPR032675 -
Mupr12613g00002 1314 ProSiteProfiles TIR domain profile. 36 201 IPR000157 GO:0007165
Mupr12613g00002 1314 FunFam Disease resistance protein RPS4 551 742 - -
Mupr12613g00002 1314 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 178 IPR035897 -
Mupr12613g00002 1314 Gene3D - 202 367 IPR027417 -
Mupr12613g00002 1314 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 785 IPR044974 GO:0006952
Mupr12613g00002 1314 SUPERFAMILY L domain-like 509 855 - -
Mupr12613g00002 1314 Gene3D - 35 201 IPR035897 -
Mupr12613g00002 1314 Gene3D Ribonuclease Inhibitor 541 740 IPR032675 -
Mupr12613g00002 1314 Gene3D - 370 453 IPR042197 -
Mupr12613g00002 1314 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Mupr12613g00002 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 463 IPR027417 -
Mupr12613g00002 1314 FunFam Disease resistance protein (TIR-NBS-LRR class) 35 203 - -
Mupr12613g00002 1314 Pfam C-JID domain 1148 1293 IPR045344 -
Mupr12613g00002 1314 SMART till_3 37 175 IPR000157 GO:0007165
Mupr12613g00002 1314 SUPERFAMILY L domain-like 810 1092 - -
Mupr12613g00002 1314 PRINTS Disease resistance protein signature 900 916 - -
Mupr12613g00002 1314 PRINTS Disease resistance protein signature 236 251 - -
Mupr12613g00002 1314 PRINTS Disease resistance protein signature 312 326 - -
Mupr12613g00002 1314 PRINTS Disease resistance protein signature 404 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12613g00002 Mupr-Chr12613 19999 24408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12613g00002 22 829 WRKY Transcription Factor Family AT4G12020 35.152 3.92e-121 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12613g00002 - - gmx:100797269 2189.85