Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1260g00003 ATTGTTTTGGAAATTATTGCGGTTTTTAGGCATCAAAATTGCGGTTGTGTCTTCAAAATTTTCGTCTGTGTGGTGATAGGTGAAATAGCATCAAACATGAGGGGAAGAAGCTACAGTTACAGCCCATCACCTCCAAGGCGTTATAGCCGGCGAAGGCGTAGTCCTAGCCCTAGGGGCCGTTACAGAGGACGTGATAGGGATTTGCCAACAAGTCTTCTCGTTCGGAACCTCCACAGAGATTGCAGGCCAGAAGATCTGCATGGTCCATTTGGCGAATTTGGTCCTCTTAAGGATGTTTACATGCCTCGTGATTACTATACTGGGGAGCCAAGAGGTTTTGGGTTTGTCCAGTATGTGGAGCCAGCTGATGCTGCAGATGCAAAATATCACATGGACGGTCAAATTCTTCTTGGTCGTGAGTTAACTGTAGTGTTTGCTGAAGAAAACAGAAAGAAACCTGCTGAGATGAGAGCAAGAGAACGTAGAAGGGATCGATCATATGATTACAGGCGATCTCCACGAACCTATTCACCTAGTCCAGACTATTCACCTTCTCCACGACGAAGGCGACATCAGAGGTCAATCTCACCAAGGGACAGAAGGTATAGGGATCGATCATACTCTAGATCACCATATGGATCAAGAAGCCGCAGCAGAAGTAGGAGTTATAGCAGGAGCTTGAGCCGAAGTCCAGGCTACTCTAGATAA 708 0.4647 IVLEIIAVFRHQNCGCVFKIFVCVVIGEIASNMRGRSYSYSPSPPRRYSRRRRSPSPRGRYRGRDRDLPTSLLVRNLHRDCRPEDLHGPFGEFGPLKDVYMPRDYYTGEPRGFGFVQYVEPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRHQRSISPRDRRYRDRSYSRSPYGSRSRSRSRSYSRSLSRSPGYSR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1260g00003 235 MobiDBLite consensus disorder prediction 36 65 - -
Mupr1260g00003 235 MobiDBLite consensus disorder prediction 211 235 - -
Mupr1260g00003 235 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 148 IPR000504 GO:0003723
Mupr1260g00003 235 Gene3D - 30 162 IPR012677 -
Mupr1260g00003 235 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 65 230 - -
Mupr1260g00003 235 MobiDBLite consensus disorder prediction 151 171 - -
Mupr1260g00003 235 MobiDBLite consensus disorder prediction 151 235 - -
Mupr1260g00003 235 SUPERFAMILY RNA-binding domain, RBD 70 174 IPR035979 GO:0003676
Mupr1260g00003 235 SMART rrm1_1 71 144 IPR000504 GO:0003723
Mupr1260g00003 235 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 141 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1260g00003 Mupr-Chr1260 32678 34761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1260g00003 70 191 Eukaryotic Initiation Factors Gene Family AT4G34110 28.455 9.77e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1260g00003 K12900 - gmx:100816913 184.882