Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12609g00002 ATGGAGAATAGCTGCATTCTGCCTTTTCTCCTCCTCATTCTCCACTCAAGTACAACAATAGCTGCCTTCAGTGTTGGGGGTAGTGTTGGTGTAGGTGTTGGTGTTGGTGTTGGAGTTGGTGTTGGCAATGGAAATGGAAATGGAAATGGTGGTGGTGGTGGTGATGGGAGTGGTGGAGTGGTTTGGGTTGGAGGAGGGATTAACAGCCCAGAGCCCCCTGGATCTTCAGTGCCAAGGCTTGAAGGAGCTTACACAGCACTTCAGGCATGGAAATCTGCAATCACTGAGGACCCACTTAAGATTTTAGAAAGTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTCTGTGCAAATCCTCAAGATGTAATGGCTGTATCAGCTGTCCCAGTTGTTGCAGGCATAGATCTCAACCATGCAAATTTGCGAGGAACTCTTGTCAAGGAGCTCTCTCTACTCAGTGATTTGTCTCTTCTCCACCTCAACAGTAACAGATTTACTGGCACTGTTCCTGATACATTCAGAGACCTAGTGTTTCTGGAAGAGTTAGACCTCAGCAACAACCAATTCTCAGGCCCTTTCCCTGCTGCTACTTTATACATGCCAGGCCTCATCTACTTGGACCTCAGATTCAACTCCTTCTCTGGGCCCCTCCCTCAGGAACTTTTCAGCAAGAATCTGGATGCAATTTTCCTCAATAACAACCAATTTGAAGGTGAAATTCCCCAAAACTTGGGTGGCTCCCCAGCCTCTGTGATAAACTTGGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTGGGCTTCATGGGTTCTAAAATAAAGGAGATTCTGTTCCTCAATAACCAGTTAACCGGTTGTATTCCTGAGGGAGTAGGGCTCTTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAACTCACTCATGGGTCATTTGCCAGACACACTATCTTGCCTGCAAGACATAGAAGTTCTCAATTTGGCTCATAACAAGCTTTCTGGGGAGTTATCAGACATTGTCTGCTCTTTGAGAAGCCTTGCAAATCTAACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAGCAATGCTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCACTAAACTGCATTCCTGGGAGGGACATGCAGAGACCTCAACCTGAGTGCTCTGTGATCCCTGGTGGTAGCTTAAGTTGTCTCAGAATCCCCACACCAAGGCCTCTTGTTTGTGGTTCAATGGCTGTAATATGTGCTACAAATGATTGGTGGAATATGTGA 1293 0.4586 MENSCILPFLLLILHSSTTIAAFSVGGSVGVGVGVGVGVGVGNGNGNGNGGGGGDGSGGVVWVGGGINSPEPPGSSVPRLEGAYTALQAWKSAITEDPLKILESWVGPNVCSYKGVFCANPQDVMAVSAVPVVAGIDLNHANLRGTLVKELSLLSDLSLLHLNSNRFTGTVPDTFRDLVFLEELDLSNNQFSGPFPAATLYMPGLIYLDLRFNSFSGPLPQELFSKNLDAIFLNNNQFEGEIPQNLGGSPASVINLANNKLSGNIPASLGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDIVCSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPRPLVCGSMAVICATNDWWNM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12609g00002 430 Pfam Leucine rich repeat N-terminal domain 84 118 IPR013210 -
Mupr12609g00002 430 SUPERFAMILY L domain-like 83 367 - -
Mupr12609g00002 430 Pfam Leucine rich repeat 157 214 IPR001611 GO:0005515
Mupr12609g00002 430 Gene3D Ribonuclease Inhibitor 251 372 IPR032675 -
Mupr12609g00002 430 PRINTS Leucine-rich repeat signature 181 194 - -
Mupr12609g00002 430 PRINTS Leucine-rich repeat signature 321 334 - -
Mupr12609g00002 430 FunFam Leucine-rich repeat extensin-like protein 1 84 248 - -
Mupr12609g00002 430 Gene3D Ribonuclease Inhibitor 83 250 IPR032675 -
Mupr12609g00002 430 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12609g00002 Mupr-Chr12609 3924 5962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12609g00002 78 406 Leucine-rich Repeat extension Gene Families AT3G24480 50.746 1.29e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12609g00002 - - gsj:114407518 710.294