Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12597g00001 ATGATTATCAAGCGGAACCTGAAATCCCAAATGCCGAGTCTGAAACGGGTCAAACTCGGTGACTCGGCGGGCGACGACGACGAGTGTTCCTACTCGCGCAAGAAGAGAAAGACCAATGGTTACTACCCTTTGAACCTTCTTGGCGACGTGGCCGCCGGCGTAATCCCTGTGAGTTTTCACGGGCTGCTCGGCACCCGCGTGGTGGAGAAGGGGTTCTCCGCGGCATGGTGCACGCAAGTATCGTGCAACGATGTTAAAAACGACGACGTCGTGGAACCGAAGAAGAAAAACGAGGTTCAGCGGCCAGCGCTGGTTCGAACTTCGAGGGGGCGAGTTCAGGTTCTCCCCTCGCGGTTCAATGACTCGGTTATCGATAATTGGAGGAAGGAGAGTAAGAATACTAGCTTGCGTGAATGTGATGATGATGATGATGAATTTGAATGCAAGAAGGAGAAGTTCGCGTTCAGGGCACCGTCCAAGGTTTGCAATCAAAAGAAAACGGGTTCTAAGCCCCGTAAGTATTCGGCATTGTGCAAGAGTTTTGAGAAGAGCAAGTGTACGAGTTTGCGCGGTGGCGAATTGGCCTTGAGGCGTGGGGTGGTGGTTGAAGAAGATGAGAAAGGAAGGTTTTTGGAGGTGGAAGGGGTTGGTTTGATAGGTTTGAAGAGAGATGGGTTGTTTGGGCCAGAAGATTTTTATGCCGGTGATATAGTGTGGGCCAAAGCTGGGAGAAAGGAACCTTTTTGGCCAGCCATTGTTATTGATCCTATGTCTCAGGCACCAGAGTTGGTTCTCAGGTCTTGTATAGCCGATGCTGCTTGTGTCATGTTTCTTGGGTATGCGGGAAATGAAAATCAAAGGGACTATGCATGGGTGAAGCATGGGATGATTTTTCCATTTATGGATTATGTGGACAGGTTTCAGGGGCAGTCTGAGTTGAGTTACTATAATCCTTCTGACTTCCAGATGGCAGTAGAGGAGGCATTTTTGGCGGAGCGGGGTTTCACTGAGAAGTTGATAGCAGATATAAATACGGCAGCTGGGAACAATGGTTATGACGATTCTATTCTAAAAGCCTTTCAGGAGGTCAGTGGTTCAAACCAATATGCAGGAGCAGGATATCACTTTCTGAATCAGGATTTATTTGATAAGAAAGAGACACGGCCATGTGAAGCCTGTGGATTGAGACTTCCTTACAAGATGTCAAAGAAAACAAAGGATTCAAGTCCTGGTGGCCAATTCCTATGTAGAACATGTGCTAGGTTAACAAAATCAAAGCATTATTGTGGCATATGCAAGAAGGTTTGGAATCATTCGGATAGTGGAAGTTGGGTGCGCTGTGATGGATGCAAAGTGTGGGTGCATGCAGAATGTGACAAAATTTCTAGCAACCTTTTCAAGAATCTTGAAGGCACTGATTATTACTGCCCTACTTGCAAGGCCAAGTTTGATTTTGAGTTATCTGATTCAGAAAAATCACAGCCAAAAGTCAAGTGGAGCAAAAACAATGGGCAGCTACTGCTTCCAAATAATAAGGTCACTGTTCTCTGCAATGGTGTTGAAGGCGTATATTTTCCAAGCCTTCATTCAGTTGTGTGCAAGTGTGGATTTTGTGGGACAGAAAAGCAAGCACTTAGTGAATGGGAACGACACACAGGTTCCAAGTTAAGAAATTGGAGAACAAGTATTAGGGTGAAAGATTCCATGCTACCTCTGGAACAATGGATGCTGCAGTTGGCAGAATTTCATGCTACTGCTCAAGTTTCTGTCAAACCTAAGAAACCTTCTCTAAAAGAAAGGAAACAGAAGTTGCTTACCTTCTTGCAAGAGAAGTATGAACCTGTTTATGCTAAGTGGACTACAGAACGCTGTGCTGTTTGTAGATGGGTTGAAGACTGGGACTACAATAAAATTATCATTTGCAACAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAATGTCCGAGATTTTACATCTTGGGTTTGTAAGGCTTGCGAAACACCTAACATCAAGCGAGAATGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACTGATGTTGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCTAGTGATGAGAAGATGGAGCCTGCATTGGGTATTCTCAGTATTCCATCAAATTCTTTTGTGAAGTTGCATTGTTCGGAGAAAAATGGCAGGCAGACAACAAAAATGGTCTCTTATTGTGCTTACCACAGGGCTCCCAATCCAGATACTGTTTTGATTATGCAAACCCCTCTTGGGGTCATTTCAACCAAAAGCCTTCTCCAAAAGAAAAAAACTGGTTCGAGGCTAATCTCATCTAACAGAAGAAAACAAGATGACCCTCCTGTTGATAACGCTGAGCATGAGCCATTTTCTGCTGCTAGGTGCCGTATCTTTCAAAGAACGAACCATACCAAAAAGAGAGCAGCAGATGAAGCCATTTCTCATCGAGCAAGGGGTCACTATCATCATCCTATAGATGCAATAGAGAGTTTAAATACACACCCAACAGTATATGAACCTCCGGCATTTTCTTCTTTCAGAGAACGCCTTTACCACTTGCAGAGAACCGAAAATGAACGGGTTTGCTTTGGTAGATCAGGCATACATGGATGGGGCCTCTTTGCACGTAGAACTATTCAAGAAGGAGACATGGTTCTTGAATATCGTGGTGAACAAGTGAGACGCAGCATTGCAGATCTGAGGGAAGCACGCTATAGATTAGAAGGGAAAGACTGCTACCTGTTTAAGATAAGTGAAGAAGTGGTGGTAGATGCCACTGATAAAGGGAATATAGCACGCCTGATTAATCATTCTTGCATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGTGATGACGAGAGCCGAATTGTACTCATTGCTAAGACTAACGTGTCTGCTGGCGATGAGCTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGATGAAAACAAAGTTCCCTGCCTATGTAAAGCTCCAAACTGCCGGAAATTCATGAATTAG 3060 0.4448 MIIKRNLKSQMPSLKRVKLGDSAGDDDECSYSRKKRKTNGYYPLNLLGDVAAGVIPVSFHGLLGTRVVEKGFSAAWCTQVSCNDVKNDDVVEPKKKNEVQRPALVRTSRGRVQVLPSRFNDSVIDNWRKESKNTSLRECDDDDDEFECKKEKFAFRAPSKVCNQKKTGSKPRKYSALCKSFEKSKCTSLRGGELALRRGVVVEEDEKGRFLEVEGVGLIGLKRDGLFGPEDFYAGDIVWAKAGRKEPFWPAIVIDPMSQAPELVLRSCIADAACVMFLGYAGNENQRDYAWVKHGMIFPFMDYVDRFQGQSELSYYNPSDFQMAVEEAFLAERGFTEKLIADINTAAGNNGYDDSILKAFQEVSGSNQYAGAGYHFLNQDLFDKKETRPCEACGLRLPYKMSKKTKDSSPGGQFLCRTCARLTKSKHYCGICKKVWNHSDSGSWVRCDGCKVWVHAECDKISSNLFKNLEGTDYYCPTCKAKFDFELSDSEKSQPKVKWSKNNGQLLLPNNKVTVLCNGVEGVYFPSLHSVVCKCGFCGTEKQALSEWERHTGSKLRNWRTSIRVKDSMLPLEQWMLQLAEFHATAQVSVKPKKPSLKERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPNIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKLHCSEKNGRQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQKKKTGSRLISSNRRKQDDPPVDNAEHEPFSAARCRIFQRTNHTKKRAADEAISHRARGHYHHPIDAIESLNTHPTVYEPPAFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRTIQEGDMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVSAGDELTYDYLFDPDEPDENKVPCLCKAPNCRKFMN 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12597g00001 1019 ProSitePatterns Zinc finger PHD-type signature. 624 669 IPR019786 -
Mupr12597g00001 1019 SMART PHD_3 623 670 IPR001965 -
Mupr12597g00001 1019 SMART PHD_3 428 480 IPR001965 -
Mupr12597g00001 1019 SUPERFAMILY SET domain 867 1019 IPR046341 -
Mupr12597g00001 1019 MobiDBLite consensus disorder prediction 789 803 - -
Mupr12597g00001 1019 ProSiteProfiles Post-SET domain profile. 1003 1019 IPR003616 -
Mupr12597g00001 1019 Pfam PHD-zinc-finger like domain 677 742 - -
Mupr12597g00001 1019 Gene3D SET domain 775 1019 IPR046341 -
Mupr12597g00001 1019 FunFam Histone-lysine N-methyltransferase 852 1019 - -
Mupr12597g00001 1019 CDD PHD_TCF19_like 429 479 - -
Mupr12597g00001 1019 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1019 IPR025780 -
Mupr12597g00001 1019 ProSiteProfiles Zinc finger PHD-type profile. 426 482 IPR019787 -
Mupr12597g00001 1019 ProSiteProfiles SET domain profile. 877 994 IPR001214 GO:0005515
Mupr12597g00001 1019 SMART PostSET_3 1003 1019 IPR003616 -
Mupr12597g00001 1019 ProSiteProfiles Zinc finger PHD-type profile. 621 672 IPR019787 -
Mupr12597g00001 1019 SUPERFAMILY Tudor/PWWP/MBT 227 333 - -
Mupr12597g00001 1019 SUPERFAMILY FYVE/PHD zinc finger 427 483 IPR011011 -
Mupr12597g00001 1019 ProSiteProfiles PWWP domain profile. 234 303 IPR000313 -
Mupr12597g00001 1019 Pfam PHD-finger 636 670 - -
Mupr12597g00001 1019 Gene3D - 229 335 - -
Mupr12597g00001 1019 PANTHER PHD FINGER PROTEINS 37 497 - -
Mupr12597g00001 1019 Pfam PWWP domain 235 329 IPR000313 -
Mupr12597g00001 1019 Pfam PHD-finger 428 481 IPR019787 -
Mupr12597g00001 1019 CDD PWWP_AtATX3-like 233 337 - -
Mupr12597g00001 1019 CDD PHD_ATX3_4_5_like 623 669 IPR042011 -
Mupr12597g00001 1019 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 422 484 IPR013083 -
Mupr12597g00001 1019 MobiDBLite consensus disorder prediction 783 804 - -
Mupr12597g00001 1019 FunFam Histone-lysine N-methyltransferase 611 672 - -
Mupr12597g00001 1019 Pfam SET domain 888 993 IPR001214 GO:0005515
Mupr12597g00001 1019 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 615 672 IPR013083 -
Mupr12597g00001 1019 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 673 754 IPR013083 -
Mupr12597g00001 1019 SMART set_7 877 1000 IPR001214 GO:0005515
Mupr12597g00001 1019 SUPERFAMILY FYVE/PHD zinc finger 622 686 IPR011011 -
Mupr12597g00001 1019 ProSiteProfiles Extended PHD (ePHD) domain profile. 675 733 IPR034732 -
Mupr12597g00001 1019 CDD SET_SETD1-like 864 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12597g00001 Mupr-Chr12597 4813 16026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12597g00001 883 1019 C2H2 Transcription Factor Family AT2G23740 36.364 4.96e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr12597g00001 SET 1.3e-17 No_clan