Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12595g00001 ATGAGTAAATTGGGGGAGAAAGCAAGGGCAAAGATGGAAGAAATGCAGGTATACATAAAGCGTGAATCGGTGCAGTGTCTGCCGTTTCCCGATAAGCCCGAGAGAGAAAAGAAAAAGGAACTGTTCACAGATCTGCGAGGTGTGGGAACAAACGACTCAGTGAGTGACTCACGTCACCAACACAGCACAGGCTTTTATTTCTTTTCCCTTTCTATGCTCGAGACCTTAACACCTTTCGCAAAACCCGATCCAACAATGTTCAAAAGAAAAGCTTTAACAAGGTCTTCTGACTCGGACCGCGATTTATCGGATAAGAGAAGAAGCCCAAGTGGGGTGTATAGGTTGGAAGAAAGGTGTGGTTGTGATATGGAGGAGGATGAGATTCAAGCAGAGGGATGTAATAAGTTCCCTAGAGTTGGAAATGGTAGGAGCGAGCAGTACCAAGAGGAGGAGGAAGATGGTGGAGAGATAAGAAGGAGAGGAGGTGGTGGTGGAAGTGATGGTAGCACGAATCATTTCCAAAGTAGTTGGCATCACTCTTCTCGAATCATAAGGGTGTCTAGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTGATGACTTCAAAGGGGTTAAGAGACAGAAGGGTTAGGCTGTCTGTATCCACAGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTATGAGCAACCTAGTAAGGCTGTGGAGTGGCTAATCAAAGCTGCTCAAGATGCTATCTCTGAGCTTCCTTCTCTCAACAATCCCTTCCCTGACACCCCCAAGCAGCCAAGTGATGAGAAAAGGCCTAGTGGTCAACGCGGGTTTGATGATGCAGATGGAGACACCAATTACCAACATAACCTCTCTTTGTCCAAGTCTGCTTGTAGTAGCACTTCCGAGACAAGCAAGGGCTCGGGCTTGTCTCTCTCACGTTCTGAGATCCGTGTGAACCGCGAGAAGGCCAGGGAGAGGGCACGGGAGAGAGCTGCAAAAGAGAAGGAGAAGGATAAGGATAAGGAGAAAGAGAAAGAGAAAGAGAAAGAGAATGAGTCTAGCATTGCACATCACAACCACAACCACAACCACAACCACATGTCTCACACTGCTTCTTTCACTGAGCTTCTCACTGGGGGGATTGGAAGCACAGTTACAGTTCCCACAACTACAAGTCCTAACGGATCATCAGTTCATCAGATCCACGACGATGGCAGTCTATTCAACAAGGGAACAACAGGAAGCAGGCAACATTGGTCTTCAACAGTAACACCAATGGACTACTTCACCTCAGGTTTGTTGGTGGGGCCTTCTTCATCATCTGCTGCTAGAACACAACAACATCAATCTTCTTCAGGACACTTCCAATTGGGACAACATCAACATCATCATCATCATCATCATCATCACGCCCTTCCCATCTCGCCATTCAGTGGAGAAAACCACTCGGATCAGATGCAGCATTTTTCCTTCATGCCAGACCACCATATAAACATGCCACCTGTGGTCACTTCTGGCTCTTCTTCTCAGCCCACCGGGGGTGACTATAACCTAAACTTCTCCATCTCCTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTTTTTTGCCTCACCTCCAGAGGTTTCAACCTATAGACGGATCATCCAATCTTCCTTTCTTTATAGGAGCTCCTGCTCCTGCTTCAGCTTCAGCTTCTGCTGCTCCACCCATGGAAAACAACAACAACAACAACCATCACCAACTTCAGTTCTCACCCGTCTTCGATGCCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCATCATTCTGACCACAAGGGAAAAGGCAAGAACTAA 1854 0.4763 MSKLGEKARAKMEEMQVYIKRESVQCLPFPDKPEREKKKELFTDLRGVGTNDSVSDSRHQHSTGFYFFSLSMLETLTPFAKPDPTMFKRKALTRSSDSDRDLSDKRRSPSGVYRLEERCGCDMEEDEIQAEGCNKFPRVGNGRSEQYQEEEEDGGEIRRRGGGGGSDGSTNHFQSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGYEQPSKAVEWLIKAAQDAISELPSLNNPFPDTPKQPSDEKRPSGQRGFDDADGDTNYQHNLSLSKSACSSTSETSKGSGLSLSRSEIRVNREKARERARERAAKEKEKDKDKEKEKEKEKENESSIAHHNHNHNHNHMSHTASFTELLTGGIGSTVTVPTTTSPNGSSVHQIHDDGSLFNKGTTGSRQHWSSTVTPMDYFTSGLLVGPSSSSAARTQQHQSSSGHFQLGQHQHHHHHHHHHALPISPFSGENHSDQMQHFSFMPDHHINMPPVVTSGSSSQPTGGDYNLNFSISSGLAGYNRGTLQSNSPSFLPHLQRFQPIDGSSNLPFFIGAPAPASASASAAPPMENNNNNNHHQLQFSPVFDARLQLCYGDGTRHHSDHKGKGKN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12595g00001 617 Pfam TCP family transcription factor 191 336 IPR017887 -
Mupr12595g00001 617 Coils Coil 316 352 - -
Mupr12595g00001 617 ProSiteProfiles R domain profile. 316 334 IPR017888 -
Mupr12595g00001 617 ProSiteProfiles TCP domain profile. 192 250 IPR017887 -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 436 485 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 262 276 - -
Mupr12595g00001 617 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 162 533 IPR005333 GO:0003700
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 250 363 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 283 313 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 87 109 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 314 358 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 134 181 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 144 160 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 457 471 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 167 181 - -
Mupr12595g00001 617 MobiDBLite consensus disorder prediction 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12595g00001 Mupr-Chr12595 20709 24119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12595g00001 170 617 TCP Transcription Factor Family AT4G18390 42.797 5.55e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr12595g00001 TCP 1.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12595g00001 - - gmx:100806032 550.436