Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12590g00006 ATGGAGGGTGGTGGAGGAAGCGAAGGTTACAATGGAGTGGTGATGAGCATGACAAGAGACCCCAAGCCGAGGCTAAGGTGGACATCAGATCTTCACGACCGCTTTGTGGATGCCGTCACAAAGCTTGGTGGCCCCGATAAGGCGACTCCTAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGGCTGACACTATATCACTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAACCAAATGAGGAAGTGCACAGAGAGAATAGTAGTGAGTCCATTTCAGGATGTTCGTATGTAAATTTTAGTAATCGTTCTTCAGGGCCTAACACCAGTTACAGAGGTGATAATGAAGGGGGTTTGCAATTGCATAACCAAAATAGAGAAATCTCAATAGCAGAAGCACTGAGGCGTCAGATCGAGGTTCAAAAGAGATTGGAAGAACAGCTCGAGGTACAAAAGAAATTGCAGATGAGAATAGAGGCGCAGGGGAAGTATTTGCAAGGTGTGTTGGAGAAAGCCCAGAGGAACCTTTCCCTGGATGGAGAAGGGAGTCTTGAAGCATCAAGAGCTCAGTTGAGTGAATTCAACTCTGCATTGTCAAATTTCATGGAAAATATGAATAAAGATAGCGAAGAGAAGATAATAGAAGTGAATGATTTTTGTAGTAAGAGGCATGGCTCAGGTTTCCATTATGAGGAAGTAGGGAGAGAACAAAAGGCCAAGGTTGAAGGGGGTTCAATACAGTTTGACTTAAACATCAAAGGTAGCAATGACCTTGTATCTGCAGGTGGAGCTGAAATGGATGCCAATATGATTTCATATAGGCTATAA 840 0.4381 MEGGGGSEGYNGVVMSMTRDPKPRLRWTSDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKPNEEVHRENSSESISGCSYVNFSNRSSGPNTSYRGDNEGGLQLHNQNREISIAEALRRQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQGVLEKAQRNLSLDGEGSLEASRAQLSEFNSALSNFMENMNKDSEEKIIEVNDFCSKRHGSGFHYEEVGREQKAKVEGGSIQFDLNIKGSNDLVSAGGAEMDANMISYRL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12590g00006 279 FunFam Myb family transcription factor 21 79 - -
Mupr12590g00006 279 Gene3D - 21 79 - -
Mupr12590g00006 279 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
Mupr12590g00006 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 217 IPR044848 GO:0003700
Mupr12590g00006 279 SUPERFAMILY Homeodomain-like 22 79 IPR009057 -
Mupr12590g00006 279 Coils Coil 125 165 - -
Mupr12590g00006 279 MobiDBLite consensus disorder prediction 93 123 - -
Mupr12590g00006 279 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Mupr12590g00006 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Mupr12590g00006 279 MobiDBLite consensus disorder prediction 76 123 - -
Mupr12590g00006 279 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12590g00006 Mupr-Chr12590 43901 46169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12590g00006 4 198 G2-like Transcription Factor Family AT4G13640 50.739 1.04e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr12590g00006 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12590g00006 - - gmx:100819756 446.047