Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12590g00002 ATGGCAGCAAATCTTAACTGCGACATGCCCCTCACTCACCACCTTCATTGGTTCTCACCAAAAACCGGAATTTACCAAAGCAAACACGCTCCCGTGGACCTTCCCAACGACCCTTTTCTCGACCTCGTTTCCTTCATTTTTTCTCACCGCCATAATGGGGTTTCAGCCCTCGTCGATTCCTCATCTGGGTCTTCCATTTCCTACTCAAAGTTGTTACCTTTGATCCAATCCGTGGCCTCTGGTCTTCACAAAATGGGTGTTTCGCAAGGTGACGTGGTCTTGCTTCTTCTCCCAAATTCCATTTTCTACCCCATTGTGTTCTTGGCTGTTCTCTATCTTGGTGCTGTTGTCACACCCTTGAACCCTCTTAGTAGTGTCTATGAAATACGTAGACAGGTTGCTGAGTGTGGTGTGAGTCTCGCTTTTACCGTGCCTGAAAATTTCAAGAAACTAGAGCCATTGGGGATTTCTGTTATTGCTGTGCCAGAGAATGAGGAGGGTTTGAGGCATGGTTGTTTCTCATGCTTTTGTGAGTTGGTTTCTGGTGAGTTTGACTTGCCTCAGAGGCCTGTTATTAAGCAGGATGACACAGCAGGGATATTGTATTCTTCAGGGACTACTGGGGTGAGCAAAGGGGTTGTTCTGTCACATAAGAATCTTATTTCTATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCCCAATATGAACACTCTTGCTTGAGGAATGTATATCTGGCTGTTTTGCCAATGTTCCATGTGTATGGTTTGTCGCTATTTGCTGTGGGATTGCTGTCTTTGGGTTCTACTGTTGTTGTCATGAGCAAATTTGACATTGATGAGGTTGTCAGGGTGATTGATGAGTATAAAGTTACACACTTTCCTGTTGTTCCGCCTATGTTGACAGCATTGGTGATGAGGGGAAAGGGTGTTAATGGCAGTAAGTTGCGGAGTTTGATACAGGTCTCCTGTGGTGCAGCGCCTTTGAGCAGAGGAGTTATTGATGATTTTCTCCAAACATTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACAAGAGGCTTCAATACTGAAAAGTTTCGCAATTATTCTTCAATAGGGTTATTGGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATACTGGTGCATTTTTGCCCCCAGGCAGCAGCGGTGAGCTTTGGTTGAGAGGGTCTTCAATTATGAAGGGATACTTGAATAATGAGGAAGCTACAATGTTAACAATTGATAAAGATGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATCATGATGGGTATTTACACATATCTGACCGCTTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCTCCTGCCGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGGTGCTAGGGATGAAGAAACTGGGGAGATGCCAGTGGCATTTGTGGTCAGGAAGGTTGGAAGTGTGCTGTCTCCGAAGCATATTATGGATTATGTTGCTGAGCAGGTTGCTCCATATAAGAAGGTTAGGAAAGTGTTCTTCACTAACAAGATACCAAGGTCTGCCACTGGGAAGATCCTAAGAAAGCAGCTGAGGAATTGCTTGACTTCTAAACTATAA 1662 0.435 MAANLNCDMPLTHHLHWFSPKTGIYQSKHAPVDLPNDPFLDLVSFIFSHRHNGVSALVDSSSGSSISYSKLLPLIQSVASGLHKMGVSQGDVVLLLLPNSIFYPIVFLAVLYLGAVVTPLNPLSSVYEIRRQVAECGVSLAFTVPENFKKLEPLGISVIAVPENEEGLRHGCFSCFCELVSGEFDLPQRPVIKQDDTAGILYSSGTTGVSKGVVLSHKNLISMVELFVRFEASQYEHSCLRNVYLAVLPMFHVYGLSLFAVGLLSLGSTVVVMSKFDIDEVVRVIDEYKVTHFPVVPPMLTALVMRGKGVNGSKLRSLIQVSCGAAPLSRGVIDDFLQTFPNVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWNTGAFLPPGSSGELWLRGSSIMKGYLNNEEATMLTIDKDGWLHTGDVVYFDHDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEIVDVAVTGARDEETGEMPVAFVVRKVGSVLSPKHIMDYVAEQVAPYKKVRKVFFTNKIPRSATGKILRKQLRNCLTSKL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12590g00002 553 CDD 4CL 34 545 - -
Mupr12590g00002 553 Pfam AMP-binding enzyme 50 455 IPR000873 -
Mupr12590g00002 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 547 - -
Mupr12590g00002 553 FunFam Long-chain-fatty-acid--CoA ligase FadD 26 450 - -
Mupr12590g00002 553 Gene3D - 451 551 IPR045851 -
Mupr12590g00002 553 Gene3D - 23 450 IPR042099 -
Mupr12590g00002 553 SUPERFAMILY Acetyl-CoA synthetase-like 50 549 - -
Mupr12590g00002 553 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Mupr12590g00002 553 FunFam 4-coumarate--CoA ligase 2 451 552 - -
Mupr12590g00002 553 Pfam AMP-binding enzyme C-terminal domain 465 539 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12590g00002 Mupr-Chr12590 11446 15364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12590g00002 17 553 Monolignol Biosynthesis Gene Families AT4G19010 61.296 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12590g00002 K01904 - gmx:100804808 988.793