Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12586g00004 ATGCATCCAGCCTGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAAAATTGTATATTGTCACCATACTTTCCATCAAGCAGAAGCAGGGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATAACCAAGTTGGTAAAGAATGCTAAAGAGGAAGATCGAAGAAGAGTAGTGGATTCATTGATATGGGAAGCATGTTGTAGGCAAAGGGATCCTATACATGGTCCCTATGGAGAGTACACAAAAGTTTACAATGAGTATAAGAAAGTGTTGGATGAACTTAAGAGATTCAAAGGCCAAAACCAACTCTTGCAATTTCCCCCTCTAGGATTAAAAGATTTGATTTCTTGCAATGGGACCAAAGGGGAACACAAAGCAGAAGTTGATAGTGCTTTGGATTATCTTCATGGGAAAAAGAATGGTATTATTGATTCTGACATTTATAATACTTATTGTTCCAATTATTTGCAAGAGTTTCAGAATATGAGGTCGGAAGTTGTCATCCCGTTTCAGCAGCACTCTCAACCATACTATATTGCAGATTTATGTGGTTTCAAGTTTGTTATTTTCTCTGGCAATTAA 591 0.3807 MHPACAACKHQRKKCSENCILSPYFPSSRSREFHAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFKGQNQLLQFPPLGLKDLISCNGTKGEHKAEVDSALDYLHGKKNGIIDSDIYNTYCSNYLQEFQNMRSEVVIPFQQHSQPYYIADLCGFKFVIFSGN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12586g00004 196 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Mupr12586g00004 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 106 - -
Mupr12586g00004 196 Pfam Lateral organ boundaries (LOB) domain 4 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12586g00004 Mupr-Chr12586 15867 16539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12586g00004 2 91 AS2 family AT1G06280 61.111 1.47e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr12586g00004 LOB 4.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12586g00004 - - gmx:100809173 341.658