Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12584g00002 ATGTCAAAATTTGGAGGTGGAAGGCAGCCAACAGGAACTCCTTCACTGGCTTGGTCCTGTGTGGTTGTTGTCTTCTCTCTTCTTGCTGGTGCGTCTGTTGTCCACAATATCTATAAGCCTAATCTTAAGATGGCAGACGCGGAGGATATTCAACCTCTTGTTTGTGACAATGGAACAGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTAGGTCGTCCTCGTCACACTGGTGTGATGGTTGGCATGGGCCAAAAGGATGCATATGTTGGTGATGAGGCACAATCAAAGAGGGGTATTTTGACTCTCAAGTACCCCATTGAACATGGGATTGTGAGCAACTGGGATGACATGGAAAAGATTTGGCATCATACCTTCTATAACGAGCTTCGTGTTGCCCCAGAAGAGCATCCAGTTCTGTTAACTGAGGCTCCTCTTAACCCCAAAGCTAACCGTGAGAAGATGACCCAAATCATGTTCGAGACTTTTAATACCCCTGCTATGTACGTAGCCATCCAGGCCGTCCTTTCACTCTATGCAAGTGGTCGAACCACTGGTATTGTGTTGGATTCTGGTGATGGTGTCAGCCACACTGTCCCCATCTATGAGGGTTATGCCCTCCCACATGCCATCCTTCGTCTTGATCTGGCTGGTCGAGACCTCACTGATTTCTTGATGAAAATCTTGACTGAACGTGGCTATTCTTTCACCACCTCAGCAGAGCGTGAAATTGTAAGGGACGTGAAAGAAAAGCTGTCTTACATAGCCCTTGGCTACGAGCAAGAACTGGAGACAGCCAGGACCAGCTCGACGGTGGAGAAGAGCTACGAGTTGCCTGATGGGCAGATCATCACTATTGGTGATGAGCGTTTCAGATGCCCAGAGGTTCTGTTCCAACCATCCATGATAGGAATGGAAGCTGCAGGCATTCACGAGACAACATACAACTCCATAATGAAGTGCGATGTTGATATCAGGAAGGACCTTTATGGTAACATTGTCCTTTCAGGAGGAACAACCATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAAATTTCTGCATTGGCACCCAGCAGCATGAAGATCAAGGTTGTAGCGCCACCTGAGAGAAAGTACAGTGTCTGGATTGGTGGTTCCATCTTGGCATCTCTTAGCACCTTCCAGCAGATGTGGATTGCAAAGGCAGAATATGACGAGTCTGGACCATCAATTGTGCACAGGAAGTGCTTCTAA 1263 0.4774 MSKFGGGRQPTGTPSLAWSCVVVVFSLLAGASVVHNIYKPNLKMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTERGYSFTTSAEREIVRDVKEKLSYIALGYEQELETARTSSTVEKSYELPDGQIITIGDERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12584g00002 420 PRINTS Actin signature 106 128 IPR004000 -
Mupr12584g00002 420 PRINTS Actin signature 185 204 IPR004000 -
Mupr12584g00002 420 PRINTS Actin signature 160 173 IPR004000 -
Mupr12584g00002 420 PRINTS Actin signature 71 80 IPR004000 -
Mupr12584g00002 420 PRINTS Actin signature 281 297 IPR004000 -
Mupr12584g00002 420 PRINTS Actin signature 94 105 IPR004000 -
Mupr12584g00002 420 Gene3D Actin; Chain A, domain 4 225 316 - -
Mupr12584g00002 420 FunFam Actin, alpha skeletal muscle 374 420 - -
Mupr12584g00002 420 SUPERFAMILY Actin-like ATPase domain 192 420 IPR043129 -
Mupr12584g00002 420 SMART actin_3 50 420 IPR004000 -
Mupr12584g00002 420 Gene3D - 183 383 - -
Mupr12584g00002 420 FunFam Actin, muscle 225 316 - -
Mupr12584g00002 420 SUPERFAMILY Actin-like ATPase domain 49 198 IPR043129 -
Mupr12584g00002 420 ProSitePatterns Actins signature 1. 98 108 IPR004001 -
Mupr12584g00002 420 FunFam Actin, alpha skeletal muscle 300 373 - -
Mupr12584g00002 420 PANTHER ACTIN 52 413 IPR004000 -
Mupr12584g00002 420 Gene3D - 53 414 - -
Mupr12584g00002 420 Pfam Domain of unknown function (DUF4516) 10 46 IPR027858 GO:0034551
Mupr12584g00002 420 ProSitePatterns Actins and actin-related proteins signature. 149 161 IPR020902 -
Mupr12584g00002 420 FunFam Actin, alpha skeletal muscle 46 206 - -
Mupr12584g00002 420 CDD NBD_sugar-kinase_HSP70_actin 53 226 - -
Mupr12584g00002 420 Pfam Actin 48 420 IPR004000 -
Mupr12584g00002 420 ProSitePatterns Actins signature 2. 401 409 IPR004001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12584g00002 Mupr-Chr12584 4733 12244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12584g00002 44 420 Cytoskeleton Gene Families AT3G12110 96.817 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12584g00002 K10355 - gmx:100792119 752.666