Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12580g00001 ATGATGCTGTCTCTAAAGATTAGTTTGACTATAGTCATAGTCCTTTCCACTGTATCCATAGTTTCTCATGCAGAAACAAGTTTGGATGTTGAAATTGAAGCTTTGAAAGCTTTCAAGAAGTCCATCTCTGGTGATCCAAATGGGGCGCTTGCAGATTGGGTTGACAGTCACCACCACTGCAACTGGTCTGGCATTGCATGTGACCCATCTTCAAATAATGTCATTTCAATTTCCCTGGTAAGTCTTCAGCTCCAAGGGGAGATTTCACCTTTCCTTGGAAACATTTCAGGCCTTCAGGTTCTTGATTTAACTTCAAACTTATTCACTGGGTACATTCCTCCTCAGCTCAGTCTTTGCACTCAACTTACTCAACTCATTCTCGTTGAAAATTCTCTCTCAGGTCCTATCCCTACCGAATTAGGAAACCTTAAAAGCCTGCAGTATTTGGATTTGGGTAGCAACATGTTGAATGGAACCCTCCCTGACAGCATATTCAACTGCACTTCTTTGTTGGCTGTTGCTTTTAATTTCAACAACCTTACTGGCAGAATCCCATCAAACATTGGGAATCTAGTTAACCTTATACAGATGCCAGGTTTTGGAAATAACTTTGTAGGATCTATACCTCTTTCCATAGGTCAGTTAGGAGCTTTGCAATCTTTCGATTTTAGCCAAAACAAGTTATCAGGTGAAATACCTCGAGAGATTGGAAACCTGACAAATTTAACAGAACTTGTATTGTTCCAGAATTCCTTGAGTGGGAAAATCCCTTCCGAGCTTGCTAAGTGTAGCAAACTTTTAAACCTTGAGTTATATGGAAATCAGTTTATTGGAAGTATTCCTCCTGAGCTAGGAAATTTAGTTCAGTTGGAGACATTGAGGTTACATCACAATAACTTGAATTCCACCATTCCATCTTCCATATTCCAGTTGAAATCATTAACACATTTAGGACTCGCAGAGAATAACTTAGAGGGAGCAATATCTTCTGAGATTGGATCTATGAATTCCTTGCAAGTTCTAACCCTTCATTTAAATAAGTTTACTGGGAAGATCCCTTCATCAATAACAAACTTGACAAACTTGACATATCTGTCAATGAGCCAGAATCTCCTTTCAGGTGAACTTCCTTCAAACTTGGGTGTGCTTCGTAATTTGAAGTTTCTTATTTTGAACTCCAACAACTTTCATGGATCCATTCCCCCTAGCATTACTAATTGTACCAGTCTAGTAAATGTAAGTTTGTCTTTTAATGCTTTAACTGGGAAAATTCCTGAGGGTTTTTCAAGGTTGCCTAATCTTACTTTCCTGTCTCTTACATCCAACAAAATGATTGGGGAAATCCCAGATGACCTCTATAACTGCTCAAATCTTAGCACTCTCAGTTTGGCAGAGAACAACTTCAGTGGATTGATAAAATCAGGTATCCAGAACCTGTCTAAACTCCTGCGCCTGCAGCTAAATGTAAATTCTTTCATAGGACCAATTCCACCAGAGATTGGAAACTTGAATCAACTCAACACTTTATCCCTTTCTGAAAATAAGTTTTCAGGTCAAATTCCTCCAGAACTCTCCAAACTTTCTCACCTTCAGGGGCTCACTCTACATGACAATCTATTAGAAGGTACAATACCTGATAAACTCTCTGAATTAAAAGACCTAACCGAACTTTTGCTGCATCAAAACAAGTTGGTTGGTCAAATACCTGATTCTATCTCAAAGCTTGAGATGCTTTCACACTTGGACCTTCATGGAAACAAACTTAATGGGTCCGTTCCAAGAAGCATGGGGCAGCTTAATCAGCTTTTAGTTTTGGACCTCTCTCAGAACCAGCTCACAGGATCAATTCCCGGTGATGTCATTGCACACTTCAAAGACATGCAGTTGTATCTTAACCTTTCTTACAACCACTTGGTTGGAAATGTTCCAACTGAGTTGGGCATGTTGGAAATGATACAAGCTATTGATATTTCAAACAATAATCTTTCAGGTTTCATTCCCAAAACACTTGCTGGGTGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAATATTTCAGGTCCTATTCCTCCAGAAGCTTTTAGTCACATGGACTTGCTTGAAAGCTTAAACCTCTCAAGAAATCATTTAGAAGGAGAAATCCCTGAAACATTCGCAGAACTTGATCATCTTAGTTCCCTAGATCTTTCTCAGAATGACTTGAAGGGAACTATTCCTGAGGGCTTCGCCAACCTTTCCAACTTAGTGCATCTCAACCTTTCTTTCAATCAACTTGAAGGTCCTGTACCTAAGACTGGAATATTTGCTCACATCAATGCATCTAGTATGATGGGAAACCAAGATCTTTGTGGAGCAAAGTTCCTATCGCCATGCAGAGAGTCAAAACATTCACTATCCAAGAAGAGCATATCTATTATTGCTGCACTTGGATCTCTTGCTATACTTCTATTTCTAGTGCTAGTGATTCTAATTCTCAATCGAAGCACCAAACTCTGCAATTCTAAAGAAAGGGATATTAGTTCGAATCATGAACCAAGCTACAGTTCAGCATTGGCACTTAAAAGGTTCGACCCAAAGGACTTGGAAAATGCTACTGGTTTTTTCAGCGCAGACCGCATCATTGGTGCTAGCAGTTTGAGCACAGTTTACAAGGGTCAAATGGAAGATGGCCAGGTTGTAGCCATAAAAAGATTGAATTTGCAACAATTCTCTGCAAATACTGACAAGATCTTCAAGAGAGAAGCCAACACCTTGAGTCAGATGAGACATAGGAATTTGGTCAAGGTACTTGGATATGCCTGGGAGAGTGGGAAAATGAAGGCTTTAGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGGCAAAGGGGTAGATCAGTCTGTGATCTCTAGGTGGACATTATCGGAAAGAGTCCGAGTTTTCATTTCTATTGCTAGTGCATTGGATTATTTGCACTCTGGTTATGATTTTCCAATTGTGCACTGTGATTTAAAGCCTTCTAACATCCTGTTAGATAAAGAGTGGGAAGCTCATGTCAGTGACTTTGGGACAGCTCGAATACTTGGTCTTCATCTGCAGGATGGTAGCACCCTTTCCTCATCAGCAGCTTTGCAAGGCACAGTTGGCTATATGGCACCAGAATTTGCCTACATGGGGAAAGTAACAACTAAAGTAGATGTGTTCAGCTTTGGTATCATAGTAATGGAGTTTCTAACCAAAAGAAGGCCAACAGGACTCTCAGAAGAGGATGGTTTGCCAATCACTTTGCGGGAGGTAGTGGAAAAAGCCCTTGCAAATGGAATAGAACAACTTGACAATATTGTGGACCCTTTGTTGACCTGGAATGTTACAGAAGATCATGATGAAGTGTTGGCAGAGCTCTTAAAGCTATCCTTGTGCTGTACCCTCCCTGATCCTGAATATCGACCCAATACGAATGAGATGTTATCTGTCCTTGTGAAGCTTCAAACAACACTATCTTGTTAA 3501 0.4005 MMLSLKISLTIVIVLSTVSIVSHAETSLDVEIEALKAFKKSISGDPNGALADWVDSHHHCNWSGIACDPSSNNVISISLVSLQLQGEISPFLGNISGLQVLDLTSNLFTGYIPPQLSLCTQLTQLILVENSLSGPIPTELGNLKSLQYLDLGSNMLNGTLPDSIFNCTSLLAVAFNFNNLTGRIPSNIGNLVNLIQMPGFGNNFVGSIPLSIGQLGALQSFDFSQNKLSGEIPREIGNLTNLTELVLFQNSLSGKIPSELAKCSKLLNLELYGNQFIGSIPPELGNLVQLETLRLHHNNLNSTIPSSIFQLKSLTHLGLAENNLEGAISSEIGSMNSLQVLTLHLNKFTGKIPSSITNLTNLTYLSMSQNLLSGELPSNLGVLRNLKFLILNSNNFHGSIPPSITNCTSLVNVSLSFNALTGKIPEGFSRLPNLTFLSLTSNKMIGEIPDDLYNCSNLSTLSLAENNFSGLIKSGIQNLSKLLRLQLNVNSFIGPIPPEIGNLNQLNTLSLSENKFSGQIPPELSKLSHLQGLTLHDNLLEGTIPDKLSELKDLTELLLHQNKLVGQIPDSISKLEMLSHLDLHGNKLNGSVPRSMGQLNQLLVLDLSQNQLTGSIPGDVIAHFKDMQLYLNLSYNHLVGNVPTELGMLEMIQAIDISNNNLSGFIPKTLAGCRNLFNLDFSGNNISGPIPPEAFSHMDLLESLNLSRNHLEGEIPETFAELDHLSSLDLSQNDLKGTIPEGFANLSNLVHLNLSFNQLEGPVPKTGIFAHINASSMMGNQDLCGAKFLSPCRESKHSLSKKSISIIAALGSLAILLFLVLVILILNRSTKLCNSKERDISSNHEPSYSSALALKRFDPKDLENATGFFSADRIIGASSLSTVYKGQMEDGQVVAIKRLNLQQFSANTDKIFKREANTLSQMRHRNLVKVLGYAWESGKMKALVLEYMENGNLDSIIHGKGVDQSVISRWTLSERVRVFISIASALDYLHSGYDFPIVHCDLKPSNILLDKEWEAHVSDFGTARILGLHLQDGSTLSSSAALQGTVGYMAPEFAYMGKVTTKVDVFSFGIIVMEFLTKRRPTGLSEEDGLPITLREVVEKALANGIEQLDNIVDPLLTWNVTEDHDEVLAELLKLSLCCTLPDPEYRPNTNEMLSVLVKLQTTLSC 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12580g00001 1166 SUPERFAMILY Protein kinase-like (PK-like) 843 1160 IPR011009 -
Mupr12580g00001 1166 Gene3D Ribonuclease Inhibitor 327 424 IPR032675 -
Mupr12580g00001 1166 CDD STKc_IRAK 875 1160 - -
Mupr12580g00001 1166 SMART serkin_6 869 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12580g00001 1166 SMART LRR_sd22_2 143 169 - -
Mupr12580g00001 1166 SMART LRR_sd22_2 215 241 - -
Mupr12580g00001 1166 SMART LRR_sd22_2 599 620 - -
Mupr12580g00001 1166 SMART LRR_sd22_2 722 748 - -
Mupr12580g00001 1166 SMART LRR_sd22_2 551 580 - -
Mupr12580g00001 1166 SMART LRR_sd22_2 359 382 - -
Mupr12580g00001 1166 PRINTS Leucine-rich repeat signature 722 735 - -
Mupr12580g00001 1166 PRINTS Leucine-rich repeat signature 602 615 - -
Mupr12580g00001 1166 FunFam Piriformospora indica-insensitive protein 2 208 305 - -
Mupr12580g00001 1166 Gene3D Transferase(Phosphotransferase) domain 1 948 1165 - -
Mupr12580g00001 1166 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 829 947 - -
Mupr12580g00001 1166 Gene3D Phosphorylase Kinase; domain 1 829 947 - -
Mupr12580g00001 1166 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 28 183 - -
Mupr12580g00001 1166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Mupr12580g00001 1166 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mupr12580g00001 1166 SUPERFAMILY L domain-like 31 301 - -
Mupr12580g00001 1166 SUPERFAMILY L domain-like 598 688 - -
Mupr12580g00001 1166 Gene3D Ribonuclease Inhibitor 28 229 IPR032675 -
Mupr12580g00001 1166 Pfam Leucine rich repeat 554 612 IPR001611 GO:0005515
Mupr12580g00001 1166 Pfam Leucine rich repeat 716 759 IPR001611 GO:0005515
Mupr12580g00001 1166 Pfam Leucine rich repeat 384 443 IPR001611 GO:0005515
Mupr12580g00001 1166 Pfam Leucine rich repeat 653 711 IPR001611 GO:0005515
Mupr12580g00001 1166 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 420 1158 - -
Mupr12580g00001 1166 SMART LRR_typ_2 215 239 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 575 598 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 359 381 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 722 745 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 287 311 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 431 455 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 599 623 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 746 771 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 503 526 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 95 119 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 527 551 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 143 167 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 383 407 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 673 697 IPR003591 -
Mupr12580g00001 1166 SMART LRR_typ_2 698 721 IPR003591 -
Mupr12580g00001 1166 SUPERFAMILY RNI-like 341 766 - -
Mupr12580g00001 1166 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 948 1165 - -
Mupr12580g00001 1166 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 618 796 - -
Mupr12580g00001 1166 Gene3D Ribonuclease Inhibitor 425 523 IPR032675 -
Mupr12580g00001 1166 FunFam Leucine-rich repeat receptor-like protein kinase TDR 310 594 - -
Mupr12580g00001 1166 Pfam Protein kinase domain 871 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12580g00001 1166 Gene3D Ribonuclease Inhibitor 529 796 IPR032675 -
Mupr12580g00001 1166 Gene3D Ribonuclease Inhibitor 230 326 IPR032675 -
Mupr12580g00001 1166 ProSiteProfiles Protein kinase domain profile. 869 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12580g00001 Mupr-Chr12580 8568 12931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12580g00001 21 1161 Receptor kinase-like Gene Family AT5G46330 54.087 0.0 1163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mupr12580g00001 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12580g00001 K13420 - gmx:100817960 1979.14