Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12573g00003 ATGATGTCAACAACGTCTCAAACTAATGTTAACCAAAGCTTGTTTGAAGAGCAGGACCAGATCCCTACGCAGATGGGGTTCGTTCCTTTCCCACCAAACCAAACCTTACCTCCTTTAGGTTGCCATCAATCTCTGAAAACCATCAGTGTCTTAGTTCCTTCACTTTCATCTGAACCTGCTGCGAGTTTTGCGGAAACCCTACTTTCATCCGCTGTTCAAAGACCACGAGAAGATCTCGCTTCAAGTTTGGTAGCAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCGAGAACTTATATATCCTCGTTTTTAACCTCGGGAGAGGATCAAATCTTTTTTGTAATTAATTTTATGATAAAATTTATTTATGATTGCGTATCATCATGTGAATTTAGGGCATGGGAAGAAGTAACCGATTGCTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATCAAGGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGGTTGGCTGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCTCACTCGCCATCAAATGAACTTGAAGACTCACAAACACCTTCTGAACTTAGTAATTTCTTGTGGTAG 792 0.4306 MMSTTSQTNVNQSLFEEQDQIPTQMGFVPFPPNQTLPPLGCHQSLKTISVLVPSLSSEPAASFAETLLSSAVQRPREDLASSLVAGGGQLLSLNRSRTYISSFLTSGEDQIFFVINFMIKFIYDCVSSCEFRAWEEVTDCLMGKRIGGDDNHHLGVSAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTPSELSNFLW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12573g00003 263 MobiDBLite consensus disorder prediction 248 263 - -
Mupr12573g00003 263 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 162 247 IPR044810 GO:0003700
Mupr12573g00003 263 Pfam WRKY DNA -binding domain 187 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr12573g00003 263 SMART WRKY_cls 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr12573g00003 263 MobiDBLite consensus disorder prediction 237 263 - -
Mupr12573g00003 263 ProSiteProfiles WRKY domain profile. 181 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr12573g00003 263 Gene3D WRKY domain 173 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr12573g00003 263 SUPERFAMILY WRKY DNA-binding domain 178 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr12573g00003 263 FunFam WRKY transcription factor 57 172 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12573g00003 Mupr-Chr12573 46894 50037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12573g00003 156 263 WRKY Transcription Factor Family AT4G39410 79.646 4.00e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr12573g00003 WRKY 7.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12573g00003 - - gmx:100127389 387.497