Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12572g00005 ATGAGGAAGAAGCTAGACACTCGTTTCCCTGCTGCTAGGATTAAGAAAATTATGCAAGCTGACGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTCTAGTTTCCAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATCGAACATATGAGATAACTTTGATGAGGGGGGCAAAGACTATGAATGCTTTTCATTTAAAACAGTGCGTGCAGACTTTTAATGTCTTTGATTTTTTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCAACTGGTGATGACCATACTGTCACTAAGAGGAGGAAAGTTGTTGAAGATGATGATAATGACAGCGACGAGGAGTTCAAGAGAAATAAGAAGCCAGAGCCTGGACACACCAGTGGCAGAGGAAGGGGTAGGGGTAGAGGTAGAGGTCGTGGCCGTGGAATTAAAACAGTAGATCAAGAGATGAGTTCACATGCCAAGTTTGAAGATGATTCTGATGCATTGAAGCAAAATGACAAGCACACTCAAAGCAATGAAAGCATGGAAAATGTGTCAGAACCTGAAGAAGTTAAGCAGACTTTCCCAGTTAGCAAACCGCCGGAAGTGTCTGTTCGAAATTTTGACTTAAATATGGACCCAGATGAGGATGATATGGATTCATTAGCCACTCCAACTCCTGCCCCAACTAGTTCATCTTCAAAATCAATGTCAGAAGAAAAGCATGAGGAATACCCTGGATGGTCCTTGTCTGATGTGGAAAAAATGACCATTGATCCCATGCAACTGACTAACTTAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATAGTAAAACAAAAAAATGATGCTTCAGGAGCAGGGCAGGCCAACATTGGTGCCCCCGAGTAA 900 0.42 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLMRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDHTVTKRRKVVEDDDNDSDEEFKRNKKPEPGHTSGRGRGRGRGRGRGRGIKTVDQEMSSHAKFEDDSDALKQNDKHTQSNESMENVSEPEEVKQTFPVSKPPEVSVRNFDLNMDPDEDDMDSLATPTPAPTSSSSKSMSEEKHEEYPGWSLSDVEKMTIDPMQLTNLNGRIDEDEEDYDEEIVKQKNDASGAGQANIGAPE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12572g00005 299 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Mupr12572g00005 299 MobiDBLite consensus disorder prediction 90 299 - -
Mupr12572g00005 299 MobiDBLite consensus disorder prediction 99 134 - -
Mupr12572g00005 299 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 173 - -
Mupr12572g00005 299 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Mupr12572g00005 299 MobiDBLite consensus disorder prediction 145 176 - -
Mupr12572g00005 299 FunFam dr1-associated corepressor homolog 1 86 - -
Mupr12572g00005 299 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12572g00005 Mupr-Chr12572 44287 48294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12572g00005 1 269 CCAAT-HAP5 Transcription Factor Family AT3G12480 42.857 2.05e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr12572g00005 CBFD_NFYB_HMF 6.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12572g00005 K21752 - gmx:100814800 434.106