Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12572g00003 ATGGTGAATTTGAGATCAGAGGTGGGGACTGATCTAGGGAGACTCTTTTTTTCACTCACTCTCAACTCAACTCCGCACTCTCCAATCGCACAAATGGCTGTCACCTTCTCAGATCTACACACCGAAGCGGGCCTCAAATCCCTCGATCAATTCCTTTCTGGGAAAACCTATATTTCTGGGGATCAATTGACAAAGGATGACATCAAAGTGTATGCAGCTGTTGTGAAAAAGCCAGGAGACTCTTTTCCCAATGCTGCCAAGTGGTACGATGTTGTCTCTTCTCGTCTTGCTCAAAGCTTCCCTGGGAACGCTCAAGGAGTAAGGTTCAGTGGCAAAGCTGCTCCAGCTGAAGCTGCACCTGCCAAGGTGGCTGCTGCTGCTGCTGAAGATGATGATGATCTTGATCTCTTTGGTGATGAGACAGAGGAGGATAAGAAGGCAGCAGAGGAAAGGGAGGCTTCTAAAAAGTCTGCCAAGAAGAAAGAAAGTGGCAAGTCTTCAGTCCTGCTCGATGTAAAGCCTTGGGATGACGAGACTGACATGAAGAAGCTGGAAGAGGCTGTCCGTAGCATTGAGATGCCTGCCAAACTGGTTCCAGTGGGATATGGGATCAAGAAGTTGCAGATCATGATGACCATTGTTGATGACCTTGTATCGGTGGACTCTCTCATTGAGGAATATCTGACAGTTGAGCCATGCAACGAGTATGTCCAAAGCTGTGACATTGTTGCATTCAACAAAATTTAA 747 0.4699 MVNLRSEVGTDLGRLFFSLTLNSTPHSPIAQMAVTFSDLHTEAGLKSLDQFLSGKTYISGDQLTKDDIKVYAAVVKKPGDSFPNAAKWYDVVSSRLAQSFPGNAQGVRFSGKAAPAEAAPAKVAAAAAEDDDDLDLFGDETEEDKKAAEEREASKKSAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPAKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEEYLTVEPCNEYVQSCDIVAFNKI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12572g00003 248 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 39 248 - -
Mupr12572g00003 248 FunFam Elongation factor 1-beta 1 like 159 248 - -
Mupr12572g00003 248 SUPERFAMILY GST C-terminal domain-like 35 97 IPR036282 -
Mupr12572g00003 248 SMART EF1_GNE_2 165 248 IPR014038 GO:0003746|GO:0006414
Mupr12572g00003 248 Gene3D - 5 100 - -
Mupr12572g00003 248 CDD EF1B 168 248 IPR014038 GO:0003746|GO:0006414
Mupr12572g00003 248 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 130 138 IPR001326 GO:0003746|GO:0005853|GO:0006414
Mupr12572g00003 248 Pfam EF-1 guanine nucleotide exchange domain 167 248 IPR014038 GO:0003746|GO:0006414
Mupr12572g00003 248 SUPERFAMILY eEF-1beta-like 162 248 IPR036219 -
Mupr12572g00003 248 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 237 248 IPR001326 GO:0003746|GO:0005853|GO:0006414
Mupr12572g00003 248 Gene3D - 158 248 IPR014717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12572g00003 Mupr-Chr12572 17793 21676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12572g00003 32 248 Eukaryotic Initiation Factors Gene Family AT5G12110 71.491 4.98e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12572g00003 K03232 - gmx:100816855 315.079