Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1256g00009 ATGGATGTCAAGTGCCAGGGCTGCTTCAACATAACAACTGTGTTTAGCCACTCTCAGACAGTTGTGGTGTGCGGTAACTGCCAGACTGTGTTGTGCCAACCAACGGGTGGAAGGGCAAGGTTAACTGAAGGGTGCTCTTTTAGGAAGAAGGGAGACTGA 159 0.5031 MDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1256g00009 52 Gene3D - 1 51 IPR023407 -
Mupr1256g00009 52 Pfam Ribosomal protein S27 1 50 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr1256g00009 52 ProSitePatterns Ribosomal protein S27e signature. 4 36 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr1256g00009 52 FunFam 40S ribosomal protein S27 1 52 - -
Mupr1256g00009 52 SUPERFAMILY Zn-binding ribosomal proteins 1 50 IPR011332 GO:0006412
Mupr1256g00009 52 PANTHER 40S RIBOSOMAL PROTEIN S27 1 52 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1256g00009 Mupr-Chr1256 35488 35881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1256g00009 1 52 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 92.308 8.25e-33 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1256g00009 K02978 - tcc:18600445 115.931