Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12565g00001 AAAGCTAAGGTGGCAGTCTATGTGCAAAAAGCAGTGTTGCATTCTATTAACGGTATACATCGCTTTCATTCAACACCTTTTGCTAGGAGCCGAGGTGGCAACATGCTCTCCAAAGAGATTGAGGAAGCAGGCTTCGGAATTGAGCCCGAAAAATTGGCCTCCATTGTTCGATCCCGCAACACCAAAACTTTAGAAAATCACAAAGGAGTTGAAGGAGTAGCAAGAGATATTTGTGTGTCCTTGAAAGAGGGCGTTAATTCAATCGATGTTGAGTACAGACAAAATATCTACGGTTCGAACCGCCATGCGGAGAAGCCCTCTAGAAGCTTTTGGATGTTCGTTTGGGACGCAATGCAGGACTTAACTCTAGTTATCCTTATGGTATGTGCTATGGTTTCGGTAGGTGTTGGAATCTTAACCCAAGGTTGGCCAAAAGGTATGTACGATGGAGTGGGAATCATACTGTGTATCATTTTAGTAGTATTTGTCACATCAATTAGCGACTATAAACAGTCTTTGCAATTTAAGGATTTGGATAGAGAAAAGAAAAATGTGAGCATTAAAGTTACAAGAGACGGGAGAAGACAAAATGTTTCAATACATGATGTAGTGGTAGGAGATATAGTCCATCTGTCAATTGGAGACATAGTTCCTGCAGATGGGTTATTCATATCAGGTTTTGGCTTATTAATAGATGAATCAAGTCTATCAGGAGAGAGTGAGGCTGTGAATGTTGATGAAGAGAAGCCTTTTGTTCTGTCCGGGACGAGGGTGCAAGATGGGTATGCTAAGATGATTGTGACATCCGTTGGTATGAGGACTGAATGGGGAAGATTGATGGATGCTCTGAACGAAGGGGGAGATGAAGAGACACCTCTTCAGGTGAAACTAAATGGAGTTGCCACCATTATTGGACAGATAGGCTTGGCTTTTGCCCTCCTCACATTCATGGTTCTCACGGGAAGGTTTTTGTGGGGGAAATTTGCTCACCATGAGATCAATAAATGGTCCCTAGATGATGCATCTAAGCTTCTCAATTTCTTTGCCACTGCTGTCCTTATAATAGTTGTGGCAGTTCCTGAGGGACTGCCTTTGGCTGTGACACTAAGCCTTGCATTTGCAATGAAGAAATTGATGAAAGACAAGGCACTGGTGAGGCACCTCTCCGCATGCGAGACCATGGGTTCAGCTGGTTGTATTTGCACTGATAAAACGGGCACTTTGACAACAAATCACATGGTTGTACACAAAATATGGATATGCGAACAAACCAAGGTCATTCAAAATGAAAATGTTTTGAAACCCTCAATTTCTGGACAGATATTTGATCTCCTTTTGCAATCCATATTCCAGAATACTGGTTCAGAGATAGTCAAAGGGCAAGATGGAAAGAACAAGATCATGGGTACTCCCACAGAGTCGGCATTGCTGGAATTTGGCTTGCTTTTAGGAGGTGATTCCCAGTTTTATAATAAGTATAAAATATTGAAGGTTGAACCTTTCAATTCAATCAGAAAAAAGATGTCAGTGCTGGTGGCTCTTCCCGACAAGTCTCGAGCATTCTGCAAAGGGGCATCAGAAATAGTTTTGAAAATGTGTGACAAAGTTGTTAATGCAGAGGGCAAAGTCGTCCATTTGAACGAGCAACAAAGGAATAGAATGACACAAGTTATCAATGGTTTTGCTTGTGAGGCTCTGAGAACATTGTGCATTGCGTTCAAGGACATTGAAGGATGTTATGAAGGTGATAGTATTCCTGAGGATAAGTACACGTTGATAGGTATAATTGGAATGAAGGATCCGGTTAGGCCTGGAGTAAAAGAAGCTGTGAAGACTTGTTTAGAAGCTGGGATTACCGTTAGAATGGTGACCGGTGACAACATAAATACTGCTAAAGCAATAGCTAGAGAATGTGGCATATTGACAGATGGAATCGCGATAGAGGGACCAGATTTCCGGAACAAGAGCCAGCAAGAAATGGTGGAGATAATACCCAAAATACAGGTGGTGGCTCGATCCTTGCCTCTTGACAAACACACCTTAGTGACCCATCTGAGGAATGACTTTAACGAGGTTGTGGCGGTAACCGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGTATTGCAGGGACTGAGGTTGCAAAAGAGAATGCGGATGTGATTGTAATGGATGATAACTTCACTACCATAGTGAATGTTACCAGATGGGGCCGTGCTGTTTACATCAATATACAAAAGTTTGTCCAGTTCCAGTTAACTGTTAATGTTGTAGCTCTCATGCTCAATTTAGTTTCAGCATGCGTATCAGGCTCAGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTAAATATGATAATGGACACTCTGGGCGCGTTGGCACTGGCTACAGAACCTCCTCATGATGGCCTCATGAAGAGGCCACCTATTGGAAGGAATGCCAAATTCATCACCAGGGTCATGTGGAGGAACATAATTGGTCAAAGCATCTATCAAATTATTGTACTTTTGGTTCTTAAATTTTGTGGGAAACAGATTCTCAAGCTCAATGGATCAGATGCTTCTACTTCAGTTCTCAATACCGTCATATTCAACACCTTTGTATTTTGC 2634 0.4237 KAKVAVYVQKAVLHSINGIHRFHSTPFARSRGGNMLSKEIEEAGFGIEPEKLASIVRSRNTKTLENHKGVEGVARDICVSLKEGVNSIDVEYRQNIYGSNRHAEKPSRSFWMFVWDAMQDLTLVILMVCAMVSVGVGILTQGWPKGMYDGVGIILCIILVVFVTSISDYKQSLQFKDLDREKKNVSIKVTRDGRRQNVSIHDVVVGDIVHLSIGDIVPADGLFISGFGLLIDESSLSGESEAVNVDEEKPFVLSGTRVQDGYAKMIVTSVGMRTEWGRLMDALNEGGDEETPLQVKLNGVATIIGQIGLAFALLTFMVLTGRFLWGKFAHHEINKWSLDDASKLLNFFATAVLIIVVAVPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVHKIWICEQTKVIQNENVLKPSISGQIFDLLLQSIFQNTGSEIVKGQDGKNKIMGTPTESALLEFGLLLGGDSQFYNKYKILKVEPFNSIRKKMSVLVALPDKSRAFCKGASEIVLKMCDKVVNAEGKVVHLNEQQRNRMTQVINGFACEALRTLCIAFKDIEGCYEGDSIPEDKYTLIGIIGMKDPVRPGVKEAVKTCLEAGITVRMVTGDNINTAKAIARECGILTDGIAIEGPDFRNKSQQEMVEIIPKIQVVARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVTRWGRAVYINIQKFVQFQLTVNVVALMLNLVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNAKFITRVMWRNIIGQSIYQIIVLLVLKFCGKQILKLNGSDASTSVLNTVIFNTFVFC 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12565g00001 878 SMART Cation_ATPase_N_a_2 64 138 IPR004014 -
Mupr12565g00001 878 SFLD C1.7: P-type atpase like 383 748 - -
Mupr12565g00001 878 PANTHER CATION TRANSPORTING ATPASE 44 878 - -
Mupr12565g00001 878 Pfam Cation transporting ATPase, C-terminus 781 878 IPR006068 -
Mupr12565g00001 878 Gene3D - 84 284 - -
Mupr12565g00001 878 Gene3D - 411 601 IPR023299 GO:0000166
Mupr12565g00001 878 SUPERFAMILY Calcium ATPase, transduction domain A 186 281 IPR008250 -
Mupr12565g00001 878 NCBIfam HAD-IC family P-type ATPase 153 425 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 NCBIfam HAD-IC family P-type ATPase 494 642 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 NCBIfam HAD-IC family P-type ATPase 661 783 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 Gene3D - 116 845 - -
Mupr12565g00001 878 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 407 606 IPR023299 GO:0000166
Mupr12565g00001 878 Pfam Cation transporter/ATPase, N-terminus 66 133 IPR004014 -
Mupr12565g00001 878 FunFam Calcium-transporting ATPase 163 284 - -
Mupr12565g00001 878 Gene3D - 398 741 IPR023214 -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 696 715 - -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 720 732 - -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 594 605 - -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 616 626 - -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 232 246 - -
Mupr12565g00001 878 PRINTS P-type cation-transporting ATPase superfamily signature 401 415 - -
Mupr12565g00001 878 FunFam Calcium-transporting ATPase 411 601 - -
Mupr12565g00001 878 SFLD p-type atpase 383 748 IPR044492 -
Mupr12565g00001 878 SUPERFAMILY Calcium ATPase, transmembrane domain M 68 878 IPR023298 -
Mupr12565g00001 878 CDD P-type_ATPase_Ca_PMCA-like 90 829 - -
Mupr12565g00001 878 Pfam haloacid dehalogenase-like hydrolase 399 710 - -
Mupr12565g00001 878 NCBIfam calcium-translocating P-type ATPase, PMCA-type 60 878 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mupr12565g00001 878 PRINTS H+-transporting ATPase (proton pump) signature 554 572 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 PRINTS H+-transporting ATPase (proton pump) signature 696 712 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 PRINTS H+-transporting ATPase (proton pump) signature 728 753 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12565g00001 878 SUPERFAMILY HAD-like 400 801 IPR036412 -
Mupr12565g00001 878 ProSitePatterns E1-E2 ATPases phosphorylation site. 403 409 IPR018303 -
Mupr12565g00001 878 Pfam E1-E2 ATPase 186 380 - -
Mupr12565g00001 878 FunFam Calcium-transporting ATPase 583 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12565g00001 Mupr-Chr12565 103 4930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12565g00001 1 878 Primary Pumps ATPases AT3G57330 68.558 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12565g00001 K01537 - gmx:100801260 1468.37