Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12556g00002 ATGCATGCAGCAGTGCAGCCAGGCGGACGATCTCCTAAGCCAATGGGTAGTCCAACATCAACATCACAGTTAAAATCTGTTTCAGATAGTGTCCAGAACAGTGCTTCTTCCTTTCCATCTCACATTAAGGGGAGGAAAAGGGAAAGGGCAGATCAAGGCTCTGAGCCTGTCAAGCGAGAACGATCAATAAAGTTTGAGGATGGAGATTCTGGTAATTTTAAGCATGATAACATTTTGAAGACAGAGATTGCCAAAATTACAGAAAAGGGAGGGCTTGTTGATAGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAACGAGAAGATAGATTTAGCTAGCCGGTCATTGCTTGCATCTGTCGTTGCAGCAACAGATAACTTAGATTGTCTTAGTCAGTTTGTGCAGCTGAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATCGGTGATGGTATTGGGTCTAGAGATGGTGATAAATCTATTGAGGAATTTCTCTTGGTATTGCTTCGGGCACTTGATAAGCTTCCAGTATATCTTCAGGCTTTACAGACGTGCAACATTGGAAAATCTGTGAATCATTTGCGAACTCATAAAAACACTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAAAGATGCAAAGTCTGGTTCTGGTCCCACTGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCTGATGTTGCCATGAAGAGTTCAGTTACACAGCTTTCTGCATCCAAAACTGCCTCTGTGAAGATTGTCCAAGGAGAGAATACTACCAGATCTGCATCAACATCTGCATTTCCAGGGCCTGCAAAATCAGTGCCATCCCCTGCATCCGCAACTACAAACTTAAAAGATGGACAGCCCCGTATTGCCACTGTGAGTGGAGGTTCTGATCTTCCCATTGCCAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGCCAATCTCACAACAACAGTCAATCTTGTTCTAGCGAACATGCTAAAACTGGAGGTCGTTCAGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGCGTGCGAATAAGATATCTGGTGGCTCTTCACGGCATCGAAAATCTAGTAATGGATTTTCAGGTTCAACTCCATCTGGAGGCCAAAGGGAAACTGGATCAAGTAGGAATTCCTCGCACAAAAATTTAACTTCAGAGAAAATATCTCAACCTGGATTAATGGAAAAAGCACATGATGGAACTTCTCTTGAGGGGAATACTCCCAAGCTGATTGTTAAAATTCCAAACCAAGGTAGAAGTCCTGCTCAAAGTGCCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCATCCTCTCCTGTCCTTCCAGAGAAGCATGATCAGTTTGATCATGGCTCAAAGGAAAAGAGTGACTTTTACCGAGCCAATATTGGCTCAGATATTAATACTGAATCATGGCAGAGTAATGATTTCAAAGATGTTTTGACTGGCTCTGATGAGGGTGATGGATCACCTGCTGCAGTTACTGATGAAGAACGCTGTCGGACTGGCGAGGATTGTAAGAAAACATTGGAGGTACCAAAAGCTGCTTCCTCGTCATCTGGAAATGAAAATAAAACTGGAAATTTGCAGGATGCTTCTTACAGCTCAATAAATGCTTTAATTGAAGGTGTTAAGTATTCTGAAGCTGATGATGTTGGAATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATGTTGAAATCTGAATTGTTAACACCGGGTGGATCTCCAGAAAGAAACACTACTGCTGTTGAACAGTTGTGCACAGGCAATGGTGGTGTTAAGTCTTCTGAAGAAAACCTTGTCCGGGATGAATGCCACTCAAATAATGGTCTTGATGGTGAACATAAGAAACAGGGTTCTGTAACAGGTGATTTAGGGGTGAAGGATGAAAATGATTCTGATTTTCGAGCATCTGGAGGGAAAGCTGCAACAGAGCTAAATGTATGTAGTATGGATTTGCAACAAGTTACTGAAACTATTTTAGAAAGCAATGGAAAATTAAATGAAAAATCTGTTCCTACTTCATTGGGTAGCCTTCCTGAAAGTACCATACAAGAAACTAGAGATGGTGATAGAAGCAAGCAACTCCAGGAGGAGGTTGATCGGGGAGTGAATGCTGGTGAAATTCTTGATGTTAAGGTCAGTTGTGTTGTGGGAGTGGAGGCAGAAGCAACTGAAAACTTGTCTTGTATCGCTGTGGAAGTGGATGTACAGAGTGATAACTGTACTGTGGAAGGATCAAGTGGTAGTGGACAGACAGCTAAAAAGCCTCCTGCCCTTATGCAGTCTGATTCAGCAAGAGGGAAAGATGAGAATGTGATCCATTCTTCTGGTTATAGTGTTGATAAGGTTCCTGAAGACTTCGGTGAACGGAAATCTGAAGAAGCTGATGATGTTGATGCTGAGAATCATGCTAGTCAGACTAAAAGGCAAAGAAATGAGTGTGAAAGTAATGCCTTGACAATGCCTGAGAATCGAGGTTTATGTTCTACTGTTACTAGTCTTGCTGCTGAACATGTGGAGGAGAATTTAGAAGTGAAAGAGGTTCGTGATCAACATGCCAGAGAGGTGCTTCCCAAAGATTCACCTAGTGTTCGTTCACAAGAAATGGATAAGCATCTTGATTCTAAAGGATCAAAATTGACTGCCATGGAAGCAGAGGAGGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCAGCTGTGTCAGATGCAGATGCAAAGGTTGAATTTGATTTAAATGAAGGTCTCAATGCAGATGATGGGAAATGTGGTGAGTTCAACAGCATTGCCATCTCTGGATGTGCACCTGTTGGTCGATTGATCAGTCCTGTGCCATTTCCTGCTTCATCTATGTCTTGTGGTATTCCTGCTCCAGTCACTGTTGCTGCTGCTGCAAAGCGGCCCTTTGTGCCACCTGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACTAGTGCATTCAGGCCAGCCGAGCCCAGGAAAGTTATGGAAATGCCTCTCGGTACACTAACTACCCCTATTCCTGATGCTGCAGCTGGAAAGCAGAGTCGAGCACCATTGGATATTGATTTGAATGTGCCTGATGAAAGAATACTTGATGATATTTCTTCTCAAGCTTGTGCTCGTCACCCAGATTCTGTATCTCTTGTAGTTGATGGTCACGATCCTGTATGCAGTAAAATGGCTTCACCTGTTCGCTGCTCTGGAGGGCTTGATCTTGATTTGAACCAAGTGGACGAAGCTTCTGATGTGGGCAATTGCTCCGCAAGCAGTAATCATAAAATTGATGTGCCAATTATGCAGGTGAAGTCATCATTGGCTGGTCCACCAAATAGAGAAGTGAATGTCCACAGGGACTTTGATTTAAACAATGGACCTTCAGTTGATGAAGTAACCACTGAATCATTGTTCTCTCAGCATGCCAGGAGCAGTGTACCATCTCAACCACCCGTTTCTGGACTTAGGGTGAGTACTGCTGAGCCAGGCAACTTCTCTTCTTGGCTTCCTTCCAGTGGCAATACCTATTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGACCAGCCCTTTTCAATTGTTGCCTCGAATGGGCCACAAAGGTTGTTGACTCCTGCTGCTGGTGGGAACCCTTTTGGACCCGATATTTATAGGGGGCCAGTATTATCATCTTCTCCTGCAGTGTCCTATGCATCTGCTCCATTTGAATATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCTGCATCTTTTTCTGCTGGACCAACTACTTACGTATATCCACCGTCAGGCAATCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTTCTGGCACAGTTTCATCCCATTACCCCAGACCATATGTTGTTGGTCTTACAGAAGGTAGCAATAGTGGTAGTGCTGACACCAGTAGAAAATGGGCAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGAGGTTCAGATATAGAGGGGAGAGATGAGAGTTCACCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTTGCCGAGGAGCATGCAAGGATCCAGCTGGCTAATAGTGTTCGTAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCTACAATCAATCCTCATGGCAATAG 4323 0.4407 MHAAVQPGGRSPKPMGSPTSTSQLKSVSDSVQNSASSFPSHIKGRKRERADQGSEPVKRERSIKFEDGDSGNFKHDNILKTEIAKITEKGGLVDSEGVEKLVQLMVPDRNEKIDLASRSLLASVVAATDNLDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGIGSRDGDKSIEEFLLVLLRALDKLPVYLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTWKKRVEAEMNIKDAKSGSGPTVHWPAKSRPSDVGQGGNRHSGASSDVAMKSSVTQLSASKTASVKIVQGENTTRSASTSAFPGPAKSVPSPASATTNLKDGQPRIATVSGGSDLPIANARDEKSSSSSQSHNNSQSCSSEHAKTGGRSGKEDARSSTAMRANKISGGSSRHRKSSNGFSGSTPSGGQRETGSSRNSSHKNLTSEKISQPGLMEKAHDGTSLEGNTPKLIVKIPNQGRSPAQSASAGSFDDPTIMNSRASSPVLPEKHDQFDHGSKEKSDFYRANIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEERCRTGEDCKKTLEVPKAASSSSGNENKTGNLQDASYSSINALIEGVKYSEADDVGMNLLASVAAGEMLKSELLTPGGSPERNTTAVEQLCTGNGGVKSSEENLVRDECHSNNGLDGEHKKQGSVTGDLGVKDENDSDFRASGGKAATELNVCSMDLQQVTETILESNGKLNEKSVPTSLGSLPESTIQETRDGDRSKQLQEEVDRGVNAGEILDVKVSCVVGVEAEATENLSCIAVEVDVQSDNCTVEGSSGSGQTAKKPPALMQSDSARGKDENVIHSSGYSVDKVPEDFGERKSEEADDVDAENHASQTKRQRNECESNALTMPENRGLCSTVTSLAAEHVEENLEVKEVRDQHAREVLPKDSPSVRSQEMDKHLDSKGSKLTAMEAEEAEECTSTTADASSMSAAAVSDADAKVEFDLNEGLNADDGKCGEFNSIAISGCAPVGRLISPVPFPASSMSCGIPAPVTVAAAAKRPFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPLGTLTTPIPDAAAGKQSRAPLDIDLNVPDERILDDISSQACARHPDSVSLVVDGHDPVCSKMASPVRCSGGLDLDLNQVDEASDVGNCSASSNHKIDVPIMQVKSSLAGPPNREVNVHRDFDLNNGPSVDEVTTESLFSQHARSSVPSQPPVSGLRVSTAEPGNFSSWLPSSGNTYSAVTISSIMPDRGDQPFSIVASNGPQRLLTPAAGGNPFGPDIYRGPVLSSSPAVSYASAPFEYPVFPFNSSFPLPSASFSAGPTTYVYPPSGNRLCFPAVNSQLMGPSGTVSSHYPRPYVVGLTEGSNSGSADTSRKWARQGLDLNAGPGGSDIEGRDESSPLPSRQLSVASSQALAEEHARIQLANSVRKRKEPDGGWDGYNQSSWQ 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 1 69 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 256 325 - -
Mupr12556g00002 1440 Pfam TFIIS helical bundle-like domain 178 227 IPR017923 -
Mupr12556g00002 1440 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1440 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 650 675 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 555 574 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 232 499 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 341 365 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 41 69 - -
Mupr12556g00002 1440 CDD TFIIS_I 152 228 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 902 922 - -
Mupr12556g00002 1440 SMART TFS2_5 150 229 IPR003617 GO:0005634
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 1416 1430 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 1374 1440 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 710 740 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 1194 1213 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 829 856 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 380 429 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 557 574 - -
Mupr12556g00002 1440 ProSiteProfiles TFIIS N-terminal domain profile. 153 230 IPR017923 -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 457 481 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 710 729 - -
Mupr12556g00002 1440 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 241 IPR035441 -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 788 864 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 788 804 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 13 40 - -
Mupr12556g00002 1440 MobiDBLite consensus disorder prediction 521 547 - -
Mupr12556g00002 1440 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 98 231 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12556g00002 Mupr-Chr12556 5580 9902 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mupr12556g00002 Med26 8.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12556g00002 - - ccaj:109810746 2438.3