Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12550g00002 ATGGAATCCTCCAACCAATTCCATGAATCATTTAGGCAAGGTCTCATAGCTGGATATGTTTTTGCTGCAACTTTTGTCATAGTCATTTATACAACCTATTGGCTACCTGCACAACTTGTCAAGAACAGGAAAAGTAGAACGGGTGGATATAAGAAAGCAACACAGAAACGTAAATCGCCACATCAAGAGTTCAAACAAGAAAAAATCAAACAGAAACGAAAGAGAGCCAGACAGATAGAAAAGGAGCTGCCTGTGGAGTTGCTAGAGAGAAGAATACAGATCAATGAAATTGGAGGGTTGACTTGTAGAACGAGCTTCACAGAACTGTGTGATACAACCGAAAATTTTAGCGAGGACAGTGCCATTGGTGTGGGAAGAACTGGGACAATGTACAAGGCAACACTTCCCAACGGTTGGTACCTGGCAGTTAAAAGACTATATGATTCTGAGTTGTTTACCAGAAGGTTCGGGAAAGAAATAATGATGGGGAGGTACAGTCACAGAAACATAATGCCCCCAATCAGTTTCTGCATAGAACAAGAAAAGAATGAAAGAATTTTGGTGTATCAATACATGTCAAATGGAAGACTTTCCGATTGGTTGAATGATATTACAACATTAGGATGGCATGCTGTTACTAGGATTACTCTAGGGGTTGCAAGAGGTTTATCTTGCCTTCATCATAGTTTGCATATGTATTGGCCCGAGAGTATCCTTTTAGGAAACAATTTTGAGCCAAGAATATCCAATTTTGGAAGGGTCATGTTCATAAACTATGATCTAGGCAAAAACATTGGATTTGAGAAAAAGGATGTCTACGACTTTGGAACATTGCTTTTCGAGGTGATTAGAGGGAAGACATTTGGCCAAACACGTAAGTGTTTTAGCAATAATAATGGTCCTTTTGGAACTTACACATATGCTACTAATCTGTTCGAGGACCCTTTTGGCTTCTATGATGCCATTGATAAATCTCTAAACGAGATAGAATTTGAAGATGAGGTTTCTGCTTTGCTCAGAGTTGCATGTGACTGTATTCATCCTTTTCCTTGTAAAAGACCCACGATGCTTGAAGTGTACGGCAAGATGAGCAACATATGGGAGAGAGATGAG 1113 0.3962 MESSNQFHESFRQGLIAGYVFAATFVIVIYTTYWLPAQLVKNRKSRTGGYKKATQKRKSPHQEFKQEKIKQKRKRARQIEKELPVELLERRIQINEIGGLTCRTSFTELCDTTENFSEDSAIGVGRTGTMYKATLPNGWYLAVKRLYDSELFTRRFGKEIMMGRYSHRNIMPPISFCIEQEKNERILVYQYMSNGRLSDWLNDITTLGWHAVTRITLGVARGLSCLHHSLHMYWPESILLGNNFEPRISNFGRVMFINYDLGKNIGFEKKDVYDFGTLLFEVIRGKTFGQTRKCFSNNNGPFGTYTYATNLFEDPFGFYDAIDKSLNEIEFEDEVSALLRVACDCIHPFPCKRPTMLEVYGKMSNIWERDE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12550g00002 371 ProSiteProfiles Protein kinase domain profile. 116 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12550g00002 371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 366 - -
Mupr12550g00002 371 Pfam Protein kinase domain 117 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12550g00002 371 SUPERFAMILY Protein kinase-like (PK-like) 100 360 IPR011009 -
Mupr12550g00002 371 MobiDBLite consensus disorder prediction 46 75 - -
Mupr12550g00002 371 Gene3D Transferase(Phosphotransferase) domain 1 192 262 - -
Mupr12550g00002 371 Gene3D Transferase(Phosphotransferase) domain 1 263 371 - -
Mupr12550g00002 371 Gene3D Phosphorylase Kinase; domain 1 85 191 - -
Mupr12550g00002 371 Coils Coil 62 82 - -
Mupr12550g00002 371 Coils Coil 369 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12550g00002 Mupr-Chr12550 20438 22469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12550g00002 103 369 Receptor kinase-like Gene Family AT1G27190 30.693 1.05e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr12550g00002 Pkinase 4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12550g00002 - - gmx:102663800 600.512