Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12550g00001 ATGGGTTTTCAAATAAAAAGGGATATTCTGTTCGAGACCTTGTTGTGTTCCTTGCTCTGTGTTTTTCATGTATGTGACAGTGTTGACAGTGATATCTTTTGTTTAAAATCCATTAAGCATTCACTGGAAGACCCATTTGAGTACTTGTCAAGCTGGAACTTCAACAACAAAACCGAAGGTTTCATATGTAGATTTATTGGCGTTGAATGCTGGCATCCTGACGAGAACAAAGTGCTAAATCTGAAACTATCAAACATGGGGCTGAAGGGTGAGTTTCCACGGAGCCTTCAGAATTGCTCGTCATTGACAGGGTTAGACCTTTCACTCAACCAGCTCGCAGGACCCATCCCATCTGATATATCCACATTACTCCCCTTTGCCACCTCCATTGATCTCTCAAATAACATATTTAGTGGGGAAATTCCAGTAGCTTTGGGTAACTGCACATACCTGAATGTTCTTAGATTGGACAACAACAGGTTAAGCGGTCATATCCCTAAAGAACTTGCGCAGCTTACCAGGATTAAAGCAATTTCGTTTTCCAACAATCATTTATCAGGGCCGGTTCCATTGTTCCCAAGTGGCGTAACTTATAATTATGCCAATAATACCCAACTTTGTGGAGAGCCTTTGCCACCCTGTTCATTGGACGGGTCAAGTGATTTCCTTCGGTCGTTAAAGGAGGGCCTTCTTTTTGGCTATGTTATTTCAGTGACTTTTGTTATTGTCATTTATATGTCCTACGCTGCACTTTGGGAACTATCAAAGCACAAAATAAAAAACCACCGGAACAAGGCTAAATTATTCGCCAAATATATTTGTTCAATTGCAAGGGGGAACACACGAACTCAAGCTCATTCCGCACACCAATTGCAACCTCTGCAGTTTCAAGACAAAGCTTACAAAGAGTTGCGCTACCGTCAACAGATTTCTGAACTAATGGATAGAATAAAGTCCACGATGAGGTTCAACGAAGTCAGAGATGCAACTAACTGCTTTTCAATAGACAATGCCATCGGGATGGGGGAAATGGGAATAATGTACGAGGGAAGTCTACCCAACGGTTGTAACCTTGCCATTAAGAGACTATTTGATTATAAACAATTTAAGAGGCAGTTTCTTTTAGAAATAAGGATTTTGGGTAAGTACAGACACACAAATATAGTTCCCCTGCTTGGGTTCTGCGTAGAAGGAAATGAAAGGATTCTGGCATACCCACACATGTCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAAGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAATAGCACTTGGGATAGCAAGAGCCTTATCCTGGCTCCATTATATATGCAATTTGCGTATTGTGCATCTTAATTTAAGTTCCAAGTGTGTCTTGCTAGATCAGAATTTTGAACCCAAATTATCCAATTTTGGACAGGCCAAATTTATGAACCCCAACATTGATGACGGTGAAAGCATGATGTTTTATGTATGCGATGGGAAGAAGGATGTCTATGACTTTGGTAGTTTGCTTTTTGAGCTAATCACAGGGAAAACAGTTAAGGAGTTGTCGTGTTGGTCCAATTCTACTAACCTATCTGGTAACCCTTCAAATTTTTATAATGCAATTGATGAATCTCTGATTGGAGCAGGTTTTGGAAATGAGGTCTATACTCTCATCAAAGTTGCATGTAAGTGTGTTCAGCCTTTCCCATATGAAAGGCCGACGATGCTTGAAGTTTATAACAATATGACAGATATATGGGGGGAACGACATGGATTCAGTGATGGTTCTGACACACTGAACGTACCTGTTTCTTGTACTAGTATAGACGAAATTGTTGAGCTATAG 1848 0.4026 MGFQIKRDILFETLLCSLLCVFHVCDSVDSDIFCLKSIKHSLEDPFEYLSSWNFNNKTEGFICRFIGVECWHPDENKVLNLKLSNMGLKGEFPRSLQNCSSLTGLDLSLNQLAGPIPSDISTLLPFATSIDLSNNIFSGEIPVALGNCTYLNVLRLDNNRLSGHIPKELAQLTRIKAISFSNNHLSGPVPLFPSGVTYNYANNTQLCGEPLPPCSLDGSSDFLRSLKEGLLFGYVISVTFVIVIYMSYAALWELSKHKIKNHRNKAKLFAKYICSIARGNTRTQAHSAHQLQPLQFQDKAYKELRYRQQISELMDRIKSTMRFNEVRDATNCFSIDNAIGMGEMGIMYEGSLPNGCNLAIKRLFDYKQFKRQFLLEIRILGKYRHTNIVPLLGFCVEGNERILAYPHMSNGRLSKWLHPLESEVTLKWPQRIKIALGIARALSWLHYICNLRIVHLNLSSKCVLLDQNFEPKLSNFGQAKFMNPNIDDGESMMFYVCDGKKDVYDFGSLLFELITGKTVKELSCWSNSTNLSGNPSNFYNAIDESLIGAGFGNEVYTLIKVACKCVQPFPYERPTMLEVYNNMTDIWGERHGFSDGSDTLNVPVSCTSIDEIVEL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12550g00001 615 Gene3D Transferase(Phosphotransferase) domain 1 408 592 - -
Mupr12550g00001 615 Gene3D Phosphorylase Kinase; domain 1 295 407 - -
Mupr12550g00001 615 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Mupr12550g00001 615 SUPERFAMILY L domain-like 28 210 - -
Mupr12550g00001 615 SUPERFAMILY Protein kinase-like (PK-like) 315 581 IPR011009 -
Mupr12550g00001 615 Pfam Protein tyrosine and serine/threonine kinase 335 582 IPR001245 GO:0004672|GO:0006468
Mupr12550g00001 615 FunFam Nuclear pore complex protein NUP107 28 191 - -
Mupr12550g00001 615 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 206 - -
Mupr12550g00001 615 ProSiteProfiles Protein kinase domain profile. 333 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12550g00001 615 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12550g00001 Mupr-Chr12550 11117 13627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12550g00001 25 594 Receptor kinase-like Gene Family AT3G28450 35.667 1.85e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mupr12550g00001 PK_Tyr_Ser-Thr 1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12550g00001 - - gmx:102664092 870.922