Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12547g00001 ATGAGTGGAAAAATACTTGGCCCTGCAATTTCTCTCATCCTTGTGGTGGGTGTTGTCATTGGCGTTGTTGCTGTCGTTCAAAGTCCAAAGGGTGACGACAGTGATGGAGGATCAGAACTAAAATCCCACAATAAGGCTGTGACAACATTGTGCCAAGAATCAGACGATAAGAAACTGTGCCAAGATGTGTTGTCTCCTGTGAACGGCACTGACCCAAAGGAATACATTGTCACTGTGGTAAAAAATTCTATGGATAGTGTCATTAAAGCTTTCAACATGAGTGACAAGCTTACAGTGGAGCATGGAAACAGCAGTACGGGCATGAAGATGGCTTTGGACGATTGCAAGGACTTGTTGCAATCTGCTATCCATGAACTAGAGGCCTCAGGTGTGATGGTTCAAGATGGCAACATTGAGGATGTTCACCAACGTGTCCCAGAACTCAAGAATTGGTTGGGTGCTGTTGTTGCCTACCAACAATCATGCCTCGATGGGTTTGACACTGATGGCGAGAAGAAGGTGCAGGAACAATTGCAAGCCGAAAGCTTAGACAAAGTAGGAAAGCTCACCGGCTTGGCACTCGATGTAGTGTCGGGAATTTCACACATCCTTGCTTCTTTGGACTTGAATTTGGCTCTCAAGCCTGCCTCTCGTCGCCTTCTCGACGTGGATCATGAAGGATGCCCTACTTGGCTCTCTGCTGCTGATCGTAAACTCTTGGCTCAAGGTAATGGTGAAATTTTGCCCCATGCTACAGTGGCTAAGGATGGTAGTGGCCAGTTTAAGACCATTGAAGAGGCTATTAACTCTTACCCCAAGAACCACCAAGGTAGATTCCTTGTGTATGTTAAGGCTGGTGTCTATGACGAGTACATTTTGGTTGACAAGAAGAAGATCAATCTTCTCATCTATGGTGATGGCCCTACAAAGACCATCATCACCGGCCGTAAAAACTTTGCAGAGGCTACTGTTGCTGATGATTTCATGGCCAAGTCAATTGCATTTGAGAACACTGCTGGTGCAGAAGGACACCAAGCAGTGGCACTTCGCGTGCAAGGTGATCGTTCAGTATTTTTTGATTGTGCATTGCGCGGTTATCAAGATACATTGTACGCTCATGCCCATCGTCAGTTTTACCGCAATTGTGAAATCTCTGGAACAATCGATTTCATCTTCGGCTACGCCACCACCTTGATTCAAAACTCCAAAATCATCGTGAGGAAGCCCAAGTCAAATCAACAAAACATAGTGGTAGCAGATGGCACAGGCCAAAAGAACATGCCCACTGGAATAGTCCTCCACAACTGCGAGATCATGGCTGACCCTAGTCTTTTTGCTGACCGCTTGACTGTGAAGACTTACTTGGCCAGGCCATGGAAGGCATTCTCAAGAGCAGTGTTTATTGAGAATGTTATTGGTGACTTGATTCATCCAGATGGCTATATTCCTTGGAACCCAGTTGAACCAAACACTCAAGATTGTTACTTTGCCGAGTTTGCCAACACTGGGCCAGGTGCTGCCGCCCAAGCAAGGGCCAAGTTTGCCAAAGGTCTTATTAGCAAGGAGGAGGCTACGCCATTCACTGCCGAACCATGGCTCCAAGCTAGCACTTGGTTGCCTGCCTCTGGCATTCCTTTTGATGCTAGCTTCACCAAAGCTTAG 1662 0.4669 MSGKILGPAISLILVVGVVIGVVAVVQSPKGDDSDGGSELKSHNKAVTTLCQESDDKKLCQDVLSPVNGTDPKEYIVTVVKNSMDSVIKAFNMSDKLTVEHGNSSTGMKMALDDCKDLLQSAIHELEASGVMVQDGNIEDVHQRVPELKNWLGAVVAYQQSCLDGFDTDGEKKVQEQLQAESLDKVGKLTGLALDVVSGISHILASLDLNLALKPASRRLLDVDHEGCPTWLSAADRKLLAQGNGEILPHATVAKDGSGQFKTIEEAINSYPKNHQGRFLVYVKAGVYDEYILVDKKKINLLIYGDGPTKTIITGRKNFAEATVADDFMAKSIAFENTAGAEGHQAVALRVQGDRSVFFDCALRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYATTLIQNSKIIVRKPKSNQQNIVVADGTGQKNMPTGIVLHNCEIMADPSLFADRLTVKTYLARPWKAFSRAVFIENVIGDLIHPDGYIPWNPVEPNTQDCYFAEFANTGPGAAAQARAKFAKGLISKEEATPFTAEPWLQASTWLPASGIPFDASFTKA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12547g00001 553 Pfam Plant invertase/pectin methylesterase inhibitor 46 195 IPR006501 GO:0004857
Mupr12547g00001 553 NCBIfam pectinesterase inhibitor domain 38 181 IPR006501 GO:0004857
Mupr12547g00001 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 198 IPR035513 -
Mupr12547g00001 553 FunFam Pectinesterase 4 247 550 - -
Mupr12547g00001 553 Pfam Pectinesterase 251 535 IPR000070 GO:0030599|GO:0042545
Mupr12547g00001 553 PANTHER PECTINESTERASE 18 540 - -
Mupr12547g00001 553 SUPERFAMILY Pectin lyase-like 251 547 IPR011050 -
Mupr12547g00001 553 FunFam Pectinesterase 43 201 - -
Mupr12547g00001 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 201 IPR035513 -
Mupr12547g00001 553 SMART PMEI_2 42 196 IPR006501 GO:0004857
Mupr12547g00001 553 Gene3D - 245 550 IPR012334 -
Mupr12547g00001 553 CDD PMEI-like_3 49 201 - -
Mupr12547g00001 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12547g00001 Mupr-Chr12547 663 2629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12547g00001 3 545 Carbohydrate Esterase AT3G62170 39.492 4.49e-131 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12547g00001 K01051 - gmx:100808559 927.932