Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1253g00001 ATGGCGGTGTTTGTTGACAGCACAACCACAGTTATACTGGGGCCCACACCTTCTCTCTGTCCTCCCTCTCCCATTACTCCTCTTTATATACGAACCAATTCCGCAATCCTCCCTCCTCAAGTCCTTCCCAAGCCTCAACTTCTAACTACGACGTCGTATCATGCTCACAGCATGGCTTCCTGCACCACGCTTTACCAGATTCTGGGAATCCGCGCCACCGCGTCGGCCGAGGAAATCAAGGCGGCGTACCGGCGACTGGCGAGGATCTGCCACCCGGACGCAGCGCCGGTGGACCGAAAGGAATCATCTGCGGGCGAGTTCATGAAAATCCATGCTGCGTACTGCACGCTATCGGATCCCGAGAAGCGTGCCAGCTATGATAGAAGCTTGTTCCGGCGACAGCGACCGCTCACAACGACGTCGTCGCGGTTTTCCGGGTACAGCGGTCGGAACTGGGAAACGGACCAGTGTTGGTAG 477 0.5702 MAVFVDSTTTVILGPTPSLCPPSPITPLYIRTNSAILPPQVLPKPQLLTTTSYHAHSMASCTTLYQILGIRATASAEEIKAAYRRLARICHPDAAPVDRKESSAGEFMKIHAAYCTLSDPEKRASYDRSLFRRQRPLTTTSSRFSGYSGRNWETDQCW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1253g00001 158 SMART dnaj_3 62 122 IPR001623 -
Mupr1253g00001 158 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Mupr1253g00001 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 44 137 - -
Mupr1253g00001 158 Gene3D DnaJ domain 49 147 IPR036869 -
Mupr1253g00001 158 CDD DnaJ 63 119 IPR001623 -
Mupr1253g00001 158 PRINTS DnaJ domain signature 83 98 IPR001623 -
Mupr1253g00001 158 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mupr1253g00001 158 PRINTS DnaJ domain signature 65 83 IPR001623 -
Mupr1253g00001 158 SUPERFAMILY Chaperone J-domain 51 130 IPR036869 -
Mupr1253g00001 158 Pfam DnaJ domain 64 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1253g00001 Mupr-Chr1253 7645 8144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1253g00001 65 127 C2H2 Transcription Factor Family AT1G74250 44.776 1.80e-10 56.6