Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12523g00001 ATGTTGAAAAACACTTGCACCGTTAAAAGTAGACTTAGGAAAGGAACATGGACACCAGAGGAAGACCAGAAATTGATTACTTATGTTACTAGATACGGCCACTGGAATTGGAACCAGATCCCCAAGTTTGCAGGTCTTGAGAGGTGTGGAAAAAGTTGCAGGCTGAGGTGGCTGAATTACTTGAGGCCGAATATCAAAAGAGGAAACTATACTCAAGAAGAAGACGAAACTATTATCAAGCTACTCCAACGTCTCGGTAACAGGTATATGAAATTGAGGAACGCAATTTTATGTCGAAATTCTTCCAATCGTGTAACAAGGGTATATAACGCTAAACACTACCAAACGTCTACTAAATGGTCTGTCATAGCTGCTCAGCTGCCAGGAAGAACGGACAACGACTTAAAGAACTACTGGCACACCAATCTGAAGAAGCGATATCAACAGAATTCAGAAAAATGTGTGAAGAATCAAGTTTCCGAGTCAAAGGATCAATTCCCAGTTCCAGTTGAAGTACTAATGCCAAACAATGATGGTCCTTTCCAAAACCTTCCAGCAACTTCTCAATCAACTGAATTCTCTATAATCCCAGATTGTATCGCTGCTAATAGCAAAGAAAATTTTGATCCTGAAGATGAATTTGCTTTTGTGTATGGATACCAAGAGCCTATGAACGAAAGCTTCTGGTTGGAATTGGAACCATATGTTGCTGACATTTCGTGCGTTCCTTTTGAGATATTGGCGCCTGAATCCGATTCCTTTAGCCCTGTGCGTGATGTGGAACTCTGGAGTCACGATAATGAATACTATGCGTGTTTGACAGTAGAAAAAAAATATTAG 840 0.4036 MLKNTCTVKSRLRKGTWTPEEDQKLITYVTRYGHWNWNQIPKFAGLERCGKSCRLRWLNYLRPNIKRGNYTQEEDETIIKLLQRLGNRYMKLRNAILCRNSSNRVTRVYNAKHYQTSTKWSVIAAQLPGRTDNDLKNYWHTNLKKRYQQNSEKCVKNQVSESKDQFPVPVEVLMPNNDGPFQNLPATSQSTEFSIIPDCIAANSKENFDPEDEFAFVYGYQEPMNESFWLELEPYVADISCVPFEILAPESDSFSPVRDVELWSHDNEYYACLTVEKKY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12523g00001 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mupr12523g00001 279 PANTHER MYB DOMAIN PROTEIN 55 4 163 - -
Mupr12523g00001 279 CDD SANT 16 61 IPR001005 -
Mupr12523g00001 279 Gene3D - 14 65 - -
Mupr12523g00001 279 Pfam Myb-like DNA-binding domain 17 76 - -
Mupr12523g00001 279 SUPERFAMILY Homeodomain-like 67 144 IPR009057 -
Mupr12523g00001 279 ProSiteProfiles Myb-like domain profile. 62 143 IPR001005 -
Mupr12523g00001 279 FunFam MYB-related transcription factor 13 66 - -
Mupr12523g00001 279 CDD SANT 69 143 IPR001005 -
Mupr12523g00001 279 Gene3D - 66 148 - -
Mupr12523g00001 279 SUPERFAMILY Homeodomain-like 15 91 IPR009057 -
Mupr12523g00001 279 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr12523g00001 279 SMART sant 66 145 IPR001005 -
Mupr12523g00001 279 SMART sant 13 63 IPR001005 -
Mupr12523g00001 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 147 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12523g00001 Mupr-Chr12523 5367 12000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12523g00001 1 270 MYB Transcription Factor Family AT1G06180 37.269 3.33e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr12523g00001 Myb_DNA-bind_6 8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12523g00001 K09422 - gmx:100810385 307.76