Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1250g00014 ATGAAAGAAAAAGGGAGCGGCGAGAGTTTTGGAGGAACAATGTGCGGTGACGCCACGAACTGGGACGAAGATGCATACAGGGAAACCGTACTCAAGGAGAGGGAGATTCAAACGCGAACCGTTTTCCGAACAGCTTGGGCCCCACCCTACAGCCCTAACATCGACACTCTCCTTGTCGCCTCCAGCGACGGTTCCGTCGCATCCTACTCCATCTCTTCCTCCATCTCCGCCTCTAAGCTAAAAAATCCCTTCGGTTTTGTTAATGCCGATACAGATACGGTATTGGCTGAACCAAATTGCTTCGTTCAAGCGCATGATGGACCTGTGTATGATGTCAAATTTTACGGTGATGGCGAAGATGCTCTGTTGCTGAGCTGTGGTGATGATGGTCGGATTCGAGGATGGAGATGGAAGGAATTTTCAAGCTCTAGTTATTCTGTTTCTTCACAAGGAAATGATATCAAGCCTGTACTTGATGTGGTGAATCCTCAACACAAGGGTCCTTGGGGTGCACTTTCACCTATCCCTGAGAATAATGCCATTGCTGTTAATACTCAGGGGGGATCTGTTTTCACTGCATCTGGTGATTCTTGTGCATATTGTTGGGATGTGGAAACTGGTAAAGTGAAAATGATATTCAAGGGGCACATGGACTATTTGCATTGTATAGTTGCACGTAACTCATCCAATCAGATCATAACAGGTTCAGAGGATGGGACCACCCGAATTTGGGATTGCAAAAGTGGAAAGTGTACCCAAGTGATTGATGCAACGAAAGATTTGAAGTTAAAGGGATCTGCTTCATGGGTTGGCTGTGTTGCTTTAGACGCAAGTGAGAGCTGGTTGGCTTGCAGTAGTGGACGTAATTTATCACTTTGGAACCTTCCTGCTTCAGAATGTGTATCAAAGATTCCAACTCGTGCTTGTGTACAGGACATGCTATTTGACAATAATCAAATTTTAACAGTTGGTACAGATCCTCTACTCAATCGCTTTGACATGAACGGCACGATCCTTTCACAAATACAGTGTGCTCCTTCGTCATCTTTTTCTATCTCCTTACATCCTGCAGGGGTCATGGCAGTTGGAGGTTATGGATGTCTTGTTGATGTTATCTCACAGTTTGGCAGCCACATGTGCACATTTCATTGCCAATGTGTCTAA 1164 0.4527 MKEKGSGESFGGTMCGDATNWDEDAYRETVLKEREIQTRTVFRTAWAPPYSPNIDTLLVASSDGSVASYSISSSISASKLKNPFGFVNADTDTVLAEPNCFVQAHDGPVYDVKFYGDGEDALLLSCGDDGRIRGWRWKEFSSSSYSVSSQGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFTASGDSCAYCWDVETGKVKMIFKGHMDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCTQVIDATKDLKLKGSASWVGCVALDASESWLACSSGRNLSLWNLPASECVSKIPTRACVQDMLFDNNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFHCQCV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1250g00014 387 Gene3D - 21 157 IPR015943 GO:0005515
Mupr1250g00014 387 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 14 386 IPR042626 -
Mupr1250g00014 387 ProSiteProfiles Trp-Asp (WD) repeats profile. 213 254 IPR001680 GO:0005515
Mupr1250g00014 387 Pfam WD domain, G-beta repeat 103 135 IPR001680 GO:0005515
Mupr1250g00014 387 Pfam WD domain, G-beta repeat 262 294 IPR001680 GO:0005515
Mupr1250g00014 387 Pfam WD domain, G-beta repeat 209 245 IPR001680 GO:0005515
Mupr1250g00014 387 Gene3D - 159 385 IPR015943 GO:0005515
Mupr1250g00014 387 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 213 245 - -
Mupr1250g00014 387 ProSiteProfiles Trp-Asp (WD) repeats profile. 102 135 IPR001680 GO:0005515
Mupr1250g00014 387 SUPERFAMILY WD40 repeat-like 45 374 IPR036322 GO:0005515
Mupr1250g00014 387 SMART WD40_4 335 373 IPR001680 GO:0005515
Mupr1250g00014 387 SMART WD40_4 206 245 IPR001680 GO:0005515
Mupr1250g00014 387 SMART WD40_4 297 333 IPR001680 GO:0005515
Mupr1250g00014 387 SMART WD40_4 95 136 IPR001680 GO:0005515
Mupr1250g00014 387 SMART WD40_4 168 203 IPR001680 GO:0005515
Mupr1250g00014 387 SMART WD40_4 248 294 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1250g00014 181 250 Eukaryotic Initiation Factors Gene Family AT2G46280 31.429 2.67e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1250g00014 - - gmx:100806423 721.079