Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1250g00012 ATGTCCACACCGCCACCGAGATCGGTTGCCGTCGCCGTGAGCGGCGGGTCCAGGGGTAGCCGGCGAGCCGTGCAGTGGGCGGTGGAGAATCTGGTCCCTCAAGCCGATAGGTTCATCTTAGTTCACGTGATCCCTCGAATCACTTCAATTGCAACACCAACTGGAGAATATATTCCCATTTCCGAAGCAGACGCCGATGTGTTCGCAGCTTATGTGCAGGATGTGAAGCAAAAGTCTGAACAAATCTTTGTTCCCTTCAAGAAACTCTGCGATTCAAACACGATGGAAACCGTATTGCTAGAAGATAATAATGCTGCAGAAGCACTTCTTAGCTTTATTTCAGACTCCGGGGTCCAAATATTAGTGCTGGGTTCTGACTCCTCAAATTTTATAACAAGGAAGCTAAAAGGACCTGGGATATCAACTACCATTCTAAGATGTGCTCCTGACGGTTATGATGTATATGTTGTAGCTAGAGATAGAATTATATCAAAGTTGGCTGATTTTTCATCTTCACATTCTCATGAGACTAGCCCAAGGTACTTCATGTCTACTAATGTAAATAAAGCAGACAATGATGCTGGCATTGGCAAGGAAATGTCGGGAATTAGTTCATCCTCATCAGAGCCTAAAATTCTAAAGAATTTCAGATTTTTATCAATATCAGAGCGTAGTTACATTGGTCTGCAAACATTTAGTCGTAGGGATTCTTTTGAAAATTCTACCAAAAATGAAGAAGAAAATCCAGAAAACTGTGGAGATGATATTGAAACTATCTTCCATTCATTTGATTCCATTGCTTCTGCACAACGTGAACAGTTAGTCATGCAAGAAGAAGTGGAACGGCTGCAGATGGAATTGCAAAATACTATTGGCATGTACAAACAGGTTTGTGAAGAGCTGGTTCAAGCTCAAAACAAGGCCCTTTTACTTTCTTCTGAATCTCTTGAAGAAACTAAAATAGTAAATGCTTCCCTAAAAAGAGAGGAGACTTTAAGAAAGATTGCTGCCGAAGAGAAAACAAAGTATTTAAAAGTCATGAAGGAACTTGAGGAGGCGAAAAATAAGTTTGCCAAAGAGTCATATGAAAGACAGATGGCTGAACTTGATGTCCTTAAAGAATCAATAGAAAAACAGAGAATTGTTGATACATTGCTCTCAAATGACAGGAGATACAGAAAGTATACCATGGATGAAATCAAGATGGCGACGAACTTCTTTGCTGAGGACTTGATAATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGTAATCTTGATCACACACCAGTAGCTGTAAAGGTTCTGCATCAGAACGCAATCAACAAGAAAGAGGAGTTTTTGAAAGAGATTGAGATTCTTAGTCAACTACATCATCCTAATATGGTTTTGTTACTTGGAGCCTGCCCTGAGAATGGTTGTCTTGTTTATGAATACCTTGAAAATGGAAGTCTAGAAGACTATCTTCTCAACAAAAATGGAAAACCACCACTTCCTTGGTTTTTTCGATTTCGTATAGTTCTTGAAATGGCTTGTGGGCTCTCGTTCTTGCATAATTCAAAGCCAGAGCCTATTGTCCATCGAGATATAAAACCTGGCAATATCTTGTTAGACAGAAATAATGTGAGCAAAATTTCAGATGTTGGGCTGGCTAAACTCCTTGCAGAAGTCGTGCCTGACAATGTCACAGAGTACAGAGAATCAATGCTTGCTGGTACTCTGCACTACATGGACCCAGAGTATCAGAGAACTGGCACTGTCCGACCAAAATCAGATGTTTATGCTTTTGGAGTTATAACTCTCCAATTGATAACTGGTTGCCATGCACGTGGACTCATTATGACAGTTGAAGATGCAATTAGAAATGGTTCATTCCGTGATATTTTAGATACATCAGCAGGAGATTGGCCACTGGATGAGACACTGGAATTGGCTCAAGTTGCCCTTAAATGCACTGCACTTAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCACTGCTGGAAAGATTTTCTGATGCGGCGAATGCTAGTGCAAGGATGGGAAGAAATAGTGCAAGTGCACCAAGCCAGTACTACTGTCCAATCCTTCAGGAAATCATGGATGATCCTTATATTGCTGCGGATGGTTTCACTTATGAGTACAGAGCAATCAAGGCATGGCTCAGCAAATACAATGTGTCACCGATGACAAAGCTGAATCTCCAGCATTCTGAGTTGACTCCAAACCATACTTTACGTTCTGCCATTCGGGAGTGGAAGTCAGGAGTGACCTTTTGA 2286 0.4116 MSTPPPRSVAVAVSGGSRGSRRAVQWAVENLVPQADRFILVHVIPRITSIATPTGEYIPISEADADVFAAYVQDVKQKSEQIFVPFKKLCDSNTMETVLLEDNNAAEALLSFISDSGVQILVLGSDSSNFITRKLKGPGISTTILRCAPDGYDVYVVARDRIISKLADFSSSHSHETSPRYFMSTNVNKADNDAGIGKEMSGISSSSSEPKILKNFRFLSISERSYIGLQTFSRRDSFENSTKNEEENPENCGDDIETIFHSFDSIASAQREQLVMQEEVERLQMELQNTIGMYKQVCEELVQAQNKALLLSSESLEETKIVNASLKREETLRKIAAEEKTKYLKVMKELEEAKNKFAKESYERQMAELDVLKESIEKQRIVDTLLSNDRRYRKYTMDEIKMATNFFAEDLIIGEGGYGKVYKCNLDHTPVAVKVLHQNAINKKEEFLKEIEILSQLHHPNMVLLLGACPENGCLVYEYLENGSLEDYLLNKNGKPPLPWFFRFRIVLEMACGLSFLHNSKPEPIVHRDIKPGNILLDRNNVSKISDVGLAKLLAEVVPDNVTEYRESMLAGTLHYMDPEYQRTGTVRPKSDVYAFGVITLQLITGCHARGLIMTVEDAIRNGSFRDILDTSAGDWPLDETLELAQVALKCTALRCRDRPELDTEVLPLLERFSDAANASARMGRNSASAPSQYYCPILQEIMDDPYIAADGFTYEYRAIKAWLSKYNVSPMTKLNLQHSELTPNHTLRSAIREWKSGVTF 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1250g00012 761 Coils Coil 266 286 - -
Mupr1250g00012 761 SMART serkin_6 407 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1250g00012 761 SUPERFAMILY Protein kinase-like (PK-like) 390 662 IPR011009 -
Mupr1250g00012 761 SMART Ubox_2 693 755 IPR003613 GO:0004842|GO:0016567
Mupr1250g00012 761 ProSitePatterns Protein kinases ATP-binding region signature. 413 434 IPR017441 GO:0005524
Mupr1250g00012 761 ProSiteProfiles Protein kinase domain profile. 407 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1250g00012 761 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 691 759 IPR013083 -
Mupr1250g00012 761 SUPERFAMILY RING/U-box 686 756 - -
Mupr1250g00012 761 Gene3D Phosphorylase Kinase; domain 1 386 479 - -
Mupr1250g00012 761 PANTHER OS02G0152300 PROTEIN 9 754 - -
Mupr1250g00012 761 CDD STK_N 8 159 - -
Mupr1250g00012 761 Pfam Protein tyrosine and serine/threonine kinase 412 663 IPR001245 GO:0004672|GO:0006468
Mupr1250g00012 761 Gene3D HUPs 7 157 IPR014729 -
Mupr1250g00012 761 Coils Coil 437 457 - -
Mupr1250g00012 761 Pfam U-box domain 691 756 IPR003613 GO:0004842|GO:0016567
Mupr1250g00012 761 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 156 - -
Mupr1250g00012 761 ProSiteProfiles U-box domain profile. 689 761 IPR003613 GO:0004842|GO:0016567
Mupr1250g00012 761 Gene3D Transferase(Phosphotransferase) domain 1 480 690 - -
Mupr1250g00012 761 Coils Coil 333 379 - -
Mupr1250g00012 761 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 479 - -
Mupr1250g00012 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Mupr1250g00012 761 CDD RING-Ubox_WDSUB1-like 691 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1250g00012 Mupr-Chr1250 73543 78222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1250g00012 4 757 Plant U-box Gene Family AT5G57035 53.886 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mupr1250g00012 PK_Tyr_Ser-Thr 1.2e-41 CL0016