Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1250g00006 CACAAGCCAAAGTCTGAAAAGTCAGCAACAGTTCCATCTTCAAAGCTGCTTCTTTCGTCAATCCTAACGAGACTCTGTGTCAGAGGTTGTGAAGTGAACCCCATCAGAGTCATGAAGAAAGGAAACTTGGGCCACGGTCTCAAACTCTCAGTTCCTGTATCTGATCAGTCTAATTTTGCCAAGTTCCTGACTGAAAGTGGGACTTTTAAGGATGGGGATCTGCTTGTCAACAGGGATGGAGTTCGAATTGTCACTCAGAATGATGTCGAAGCTCCACCTCCAATCAAGCCTACAGACGACCAGTTAACTTTGGCAGACATAGATGTAATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTAGTCCAATTGGTGCAACACAAATGGACTAGTCAGTTTTTTGCATTGAAGGTAATTCAAATGAATATTGAGGAGTCTATGCGCAAGCAGATCGCACAAGAGCTGAAAATTAATCAACAAGCACAATGTCCTTATGTTGTTGTTTGCTACCAATCATTCTATGAAAACGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTAGCTGATCTTCTGAAGAAAGTTAAAACTATTCCGGAGCCTTATCTAGCTGCCATCTGTAAGCAGGTGCTGAAGGGTTTAACGTACCTTCACCATAAAACGCATATTATCCACAGAGACTTAAAACCTTCTAATTTGTTAATAAATCATATAGGTGAAGTAAAGATTACTGACTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACATACAGCTATATGTCTCCAGAGAGAATCAATGGAAGCCAGCGAGGCTACAACTTCAAAAGTGATATATGGAGTTTGGGACTAATATTGCTCGAGTGTGCTTTGGGGCAGTTTCCATATACGCCACCTGATCAAAGTGAAATATGGGATAGCATTTTTGAGCTTATTGAAACCATTGTCGATAAACCTCCTCCTACTCCTCCATCTGAACAATTTTCTACAGAATTTTGCTCATTTATCTCAGCATGTCTACAGAAAGACCCAAAGGATCGACTGTCAGCTCAAGAATTAATGGGACATCCTTTTATCAGCTTGTATGATGACTTGGAGAGCACTGCTTGCATACGAGGAGCTTTTGCAGATGAGATGAAGAACCAGCTCCTAGAGTTACGCAAAGAT 1197 0.411 HKPKSEKSATVPSSKLLLSSILTRLCVRGCEVNPIRVMKKGNLGHGLKLSVPVSDQSNFAKFLTESGTFKDGDLLVNRDGVRIVTQNDVEAPPPIKPTDDQLTLADIDVIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQQAQCPYVVVCYQSFYENGVISIILEYMDGGSLADLLKKVKTIPEPYLAAICKQVLKGLTYLHHKTHIIHRDLKPSNLLINHIGEVKITDFGVSAIMESTSGQANTFIGTYSYMSPERINGSQRGYNFKSDIWSLGLILLECALGQFPYTPPDQSEIWDSIFELIETIVDKPPPTPPSEQFSTEFCSFISACLQKDPKDRLSAQELMGHPFISLYDDLESTACIRGAFADEMKNQLLELRKD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1250g00006 399 CDD PKc_MAPKK_plant_like 122 373 - -
Mupr1250g00006 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Mupr1250g00006 399 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 54 371 - -
Mupr1250g00006 399 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Mupr1250g00006 399 FunFam Mitogen-activated protein kinase kinase 6 188 383 - -
Mupr1250g00006 399 Gene3D Phosphorylase Kinase; domain 1 84 186 - -
Mupr1250g00006 399 ProSiteProfiles Protein kinase domain profile. 107 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1250g00006 399 SMART serkin_6 107 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1250g00006 399 Pfam Protein kinase domain 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1250g00006 399 SUPERFAMILY Protein kinase-like (PK-like) 101 374 IPR011009 -
Mupr1250g00006 399 FunFam Mitogen-activated protein kinase kinase 6 77 186 - -
Mupr1250g00006 399 Gene3D Transferase(Phosphotransferase) domain 1 187 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1250g00006 Mupr-Chr1250 24651 29847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1250g00006 38 364 MAP Kinase Kinase Gene Family AT4G29810 66.964 8.20e-169 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mupr1250g00006 Pkinase 8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1250g00006 K20603 - gmx:100789734 638.262