Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1250g00004 ATGGTTTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAACCCAAGTTGTCTGGTCACTTCCGAACTTGCTCCGCACACAAATTGTCGTGCATTGACTGTGGGGAAATATTTGGGCGTGACACCGTTCAGGATCACACACAGTGCATCACGGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGAAAAACTTTGAACGCTGCAACTGCCAAGCCTAGCAAGGATAACAAGCAAAGGCCTGAAGTTGATATTAATGTGGGGTTATCTGAGCGGCCTCCTTGGTTCTGTAGTCTTTGCAATACTAAAGCTACAAGTAAGCAAACACTTCTTCTCCATGCCGATGGAAAGAAACACAGGGCAAAGGCCCGGGCATTCCTTGCTTCAAAGCAACCACCAGTCCAGGCAGACAAATCTGCACCTGATGCAAAGGTTGCTGTGGAGACTGCTCCTAATGATGAGGTGAGAGACAACAAAAATGGAGAGTTGCCAAAATTGCAAGAGTCTTCTAAAGAAGATAACTCGAAACCAGGGAATGAAATTTCTCCATCAAAGAAAAAGAGGAAACCCGAAGCATTGGAGGATGACCTTGTTAAAAAATGCAGGAATGACACTTCAGTTGACATGGGAAATGGAGAAGTAATTCAGGGTGAAGAAGCAAAAGGAGAGAGCAATTTGAAGAAAGAAGGGATGGTGAAACCTCACTGTACAAATGCTGTCAAAAATAAAATAAAATGGAAGAAGTTTATCAAATCAGCCTTGAAATCTCATCCTGATGGAACTTTGAAGATGAAGAAACTGAGGAAAGTTGTCCTCAAAGCACTGCAGGAATCTGCCATTGTAGTGGATGAAGCTGAATTGAGTGAGGCGCTTGAGCAGAAGATCAATTCCAGCTCCAGATTTGCAGTTGAGAACAAGTGTGTGCGATTGCTGGCCAAAGATTGA 945 0.437 MVWFQCEDCGDNLKKPKLSGHFRTCSAHKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLNAATAKPSKDNKQRPEVDINVGLSERPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAFLASKQPPVQADKSAPDAKVAVETAPNDEVRDNKNGELPKLQESSKEDNSKPGNEISPSKKKRKPEALEDDLVKKCRNDTSVDMGNGEVIQGEEAKGESNLKKEGMVKPHCTNAVKNKIKWKKFIKSALKSHPDGTLKMKKLRKVVLKALQESAIVVDEAELSEALEQKINSSSRFAVENKCVRLLAKD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1250g00004 314 SUPERFAMILY beta-beta-alpha zinc fingers 85 128 IPR036236 -
Mupr1250g00004 314 MobiDBLite consensus disorder prediction 58 82 - -
Mupr1250g00004 314 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Mupr1250g00004 314 MobiDBLite consensus disorder prediction 127 198 - -
Mupr1250g00004 314 Pfam Zinc-finger of C2H2 type 95 119 - -
Mupr1250g00004 314 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Mupr1250g00004 314 Gene3D - 1 50 - -
Mupr1250g00004 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Mupr1250g00004 314 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Mupr1250g00004 314 Gene3D Classic Zinc Finger 89 129 - -
Mupr1250g00004 314 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 309 IPR039999 GO:0003677
Mupr1250g00004 314 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Mupr1250g00004 314 MobiDBLite consensus disorder prediction 149 198 - -
Mupr1250g00004 314 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Mupr1250g00004 314 FunFam UBP1-associated proteins 1C 89 132 - -
Mupr1250g00004 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1250g00004 77 229 C2H2 Transcription Factor Family AT2G19380 38.562 6.01e-18 82.4