Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12503g00002 ATGAGCGTTGCTTTCCCTCCGAGTTCCTCTTCCAAGAGGAAACGGGTCATCGGAGAGCTTGTTCAGGGTCAGGATTACGCTACCCAGCTCAAGTTTCTCCTTCAGAATCCCATTGGGCCTCACGGGTCCGTTTCCGTTTCCGTTTCCGCTAAGGAACTCGTCGCCAATGTTCTTAGATCTTTCTCTGTAACTCTTTCCATGTTGACTTCTTCCGAGGCTGACGACGAGGTTGCTCAAGACGCCTCGCAGGTTGCAGCTTCCAGCATTGATCCGAGGTCTGAGGATTCCACTGAGAGTAGGAAGAGATCGTTGCCCGCCTCAAAGGATCGCCGTGGTTCATACAAAAGAAGGAAGACTGAACAGACATGGACCATTGTTTCCAAAACTACTGATGATATTCATGCATGGAGAAAGTACGGTCAAAAGGAAATCCTAAATTCTCCATTTCCCAGGAGTTACTTCAGGTGCACTCGGAAGTATGAACAAGGTTGCCAAGCAACCAAACAGGTGCAACGGATACAAGAGAATCCTGACATGTACAATATTACGTACATTGGCTTTCACACATGCAAGGACACCCTCAATGCTCCACAAATGGTGACATACTCAGAAACTTGGGACTCATTTCTTGAGAATTCCCATCATGACTCAAATGTGCCAAATGAACAACATGATCCACCTGTTAGATCACAAAGCCCAATTGTAAAACAAGAACATCCCAACGATTACAGTAATGATCCGAGTGATCTTACAGATGCTAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAATTCCTTGAAAATAGCATCTGAAAATGCAGATACTGTGTATTCATGCACTGGCTCTCAATGTCTGGGCATAGATTTTGGGATATTTTCTTCTCATTTCAGCACCGACGACTTCCACTTTGATGAAAACCGTTTGCTTTAG 936 0.4498 MSVAFPPSSSSKRKRVIGELVQGQDYATQLKFLLQNPIGPHGSVSVSVSAKELVANVLRSFSVTLSMLTSSEADDEVAQDASQVAASSIDPRSEDSTESRKRSLPASKDRRGSYKRRKTEQTWTIVSKTTDDIHAWRKYGQKEILNSPFPRSYFRCTRKYEQGCQATKQVQRIQENPDMYNITYIGFHTCKDTLNAPQMVTYSETWDSFLENSHHDSNVPNEQHDPPVRSQSPIVKQEHPNDYSNDPSDLTDANLWSDLKDFELSNSLKIASENADTVYSCTGSQCLGIDFGIFSSHFSTDDFHFDENRLL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12503g00002 311 MobiDBLite consensus disorder prediction 223 250 - -
Mupr12503g00002 311 MobiDBLite consensus disorder prediction 76 120 - -
Mupr12503g00002 311 Gene3D WRKY domain 114 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr12503g00002 311 MobiDBLite consensus disorder prediction 76 92 - -
Mupr12503g00002 311 SUPERFAMILY WRKY DNA-binding domain 127 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr12503g00002 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 218 IPR044810 GO:0003700
Mupr12503g00002 311 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr12503g00002 311 ProSiteProfiles WRKY domain profile. 131 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr12503g00002 311 MobiDBLite consensus disorder prediction 212 250 - -
Mupr12503g00002 311 MobiDBLite consensus disorder prediction 93 120 - -
Mupr12503g00002 311 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12503g00002 Mupr-Chr12503 8616 10612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12503g00002 8 308 WRKY Transcription Factor Family AT3G56400 38.312 3.63e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr12503g00002 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12503g00002 - - gmx:100170683 431.024