Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12498g00001 ATGAAATGTTGTCATTGCTCTTTCACTCTCATAGTGTATTTTCTTTCTTTCATATCCTTCTCCTCTAAACCAATTTTCCCACAAATGGCTACCCTTCCTTCTCTCACCTTTGCACCCTTTTGCATGCTCTTCCTCCTTGTGTGCCTCACTAGTCCTTCTTGTGTTTCTTCACTTTCCTTGAGAAGGCAAGCTTCAATCCTTGTTTCCATGAAGCAAGATTTTGGGGTTGTGAACTCTTCTCTGAGAAGCTGGGACATGTCTAACTACTTGTCCCTTTGTAGTAGCTGGTATGGCATTCAGTGTGACCATGATAACATGTCTGTGGTGGCACTTGACATGTCCAATTTGAACTGTTCTGGGACAATTTCACCTTCCATCACAGGACTCTTGAGCCTTGAGAGTCTCTCACTCCAGGGAAATAGCTTCTCTGGGGAGTTTCCAAGTGACATTCACAAGCTCCCAAAGCTGAGGTTCCTCAACATGTCTATTAACATGTTCAGTGGGAACTTGACTTGGCAATTCTCCCAGCTTAAGGAACTTGAGGTGCTGGATGCCTATGACAATGCTTTCAATGGCTCACTTCCTGAGGGTGTCACTGAGCTTCCAAAGCTCAAGCACTTGAACTTTGGAGGGAACTACTTCTCTGGGGAAATCCCTTCAAGATATGGCAAAATGGGGCAGCTCAAGTTTCTTTCCCTTGCAGGGAATGATTTGAGAGGCTTGATACCAAGTGAGCTTGGGAATCTCACTAACCTCACTCATCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGCTGAGCAACTTGGTCCATCTAGACATTGCAAACTGTGGCTTGACAGGTCCAATTCCTGTAGAGTTGGGAAGCCTTTACAAGTTAGACACTCTCTTCTTGCAAACCAATCAGCTTAGTGGCTCAATCCCTAAACAGCTAGGGAACTTGACTGGCTTGAAGGCCCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTTATGAGTTCTCAGCCCTTCATGAGCTCACCCTCTTGAACCTGTTTATAAACAAGTTGCATGGAGAAATCCCTCACTTCATTGCTGAGTTACCTAAATTGGAGACTCTCAAGCTTTGGCAGAACAACTTCACTGGAGTGATTCCTTCAAATCTTGGCCAGAATGGAAGGCTGGTTGAGCTTGACTTGTCAACAAATAAGCTCACTGGTTTGGTGCCAAAGTCTCTATGCCTTGGAAATAGGCTCAGAATTTTGATCCTGCTCAAGAACTTTCTGTTTGGATCTTTGCCTGATGAACTTGGCCAATGCCACACTCTCCAAAGAGTCCGTTTGGGCCAGAACTATTTAACTGGGCCACTCCCACATGAATTTCTTTATTTGCCTGAGCTATATCTTGTGGAGCTTCAGAACAATTATCTTAGTGGTGGCTTTCCACAATCAACTAGCAACAACACACCCTCCAAACTAGCACAGTTGAACCTATCAAACAACCGCTTCTCAGGGCCTCTTCCAACCTCAATTGCAAATTTTCCAAACTTACAAATTCTTCTGCTTAGTGGAAACAGATTCTCTGGGGAAATCCCACCAGATATAGGGAGGTTGAAAAACATCCTCAAGTTGGATATAAGTGTTAACAACTTTTCAGATACTATTCCACCTGAGATAGGTAAATGTGTCCTACTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATACCAGTCCAAGTTTCTCGAATTCACATATTAAACTATCTCAATGTCTCATGGAACCACCTAAACCAAAGCCTTCCCAAGGAACTTAGGGCTATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAACAACTTCTCAGGCTCAATACCTGAGGGGGGGCAATTCTCAATCTTTAACTCCACATCCTTTGTTGGCAATCCTCATCTATGTGGATATGACTCAAAGCCATGCAACCTTTCTTCAACAGCTGTGTTGGAGTCTCAAGAAAAAGGAAGCTCAAAACCTGGGGTCCCTGGGAAGTTCAAGTTCCTCTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTGCAACCTTGGCCATCATCAAGAGTAGGAAGACAAGGAAGCACTCCAATTCATGGAAGTTAACAGCATTCCAGAAGCTGGAATATGGGAGTGAGGACATCATAGGGTGCATAAAGGAAAGCAATGTGATAGGAAGAGGAGGATCTGGGGTTGTGTACAGAGGAACCATGCCAAAAGGAGAGGAAGTGGCAGTGAAGAAGCTCTTGGGAATCAACAAAGGCTCTTCCCATGACAATGGCCTCTCTGCAGAAATAAGGACACTGGGGAGAATCAGACACAGGTACATTGTGAGGCTGCTGGCATTTTGCTCAAACAGAGAAACCAACTTGCTTGTCTATGATTACATGCCTAATGGAAGCTTGGGGGAAGTCTTGCATGGAAAAAGGGGTGAGTTTCTTAAGTGGGATACTAGGCTCAAAATAGCCACAGAAGCTGCAAAAGGACTTTGCTATTTGCACCATGATTGTTCCCCCTTGATTATCCATAGGGATGTCAAGTCAAACAACATATTGCTCAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCATGCAAGATAATGGGACATCAGAGTGCATGTCTTCCATTGCTGGTTCCTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTGATAACAGGACGAAGACCAGTGGGGGATTTTGGGGAAGAAGGATTAGACATTGTTCAATGGACCAAGATGCAAACCAATTGGGACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTACACCACATTCCTTTAGCTGAAGCAAAGCAGGTGTTTTTTGTGGCAATGTTGTGTGTTCATGAACACAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCCAAAAAGAACAGTTCCCTCCCTGACTTTTTAGTTGATTAA 3063 0.4398 MKCCHCSFTLIVYFLSFISFSSKPIFPQMATLPSLTFAPFCMLFLLVCLTSPSCVSSLSLRRQASILVSMKQDFGVVNSSLRSWDMSNYLSLCSSWYGIQCDHDNMSVVALDMSNLNCSGTISPSITGLLSLESLSLQGNSFSGEFPSDIHKLPKLRFLNMSINMFSGNLTWQFSQLKELEVLDAYDNAFNGSLPEGVTELPKLKHLNFGGNYFSGEIPSRYGKMGQLKFLSLAGNDLRGLIPSELGNLTNLTHLFLGYYNQFDGGIPPQFGKLSNLVHLDIANCGLTGPIPVELGSLYKLDTLFLQTNQLSGSIPKQLGNLTGLKALDLSFNMLTGGIPYEFSALHELTLLNLFINKLHGEIPHFIAELPKLETLKLWQNNFTGVIPSNLGQNGRLVELDLSTNKLTGLVPKSLCLGNRLRILILLKNFLFGSLPDELGQCHTLQRVRLGQNYLTGPLPHEFLYLPELYLVELQNNYLSGGFPQSTSNNTPSKLAQLNLSNNRFSGPLPTSIANFPNLQILLLSGNRFSGEIPPDIGRLKNILKLDISVNNFSDTIPPEIGKCVLLTYLDLSQNQLSGPIPVQVSRIHILNYLNVSWNHLNQSLPKELRAMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVGNPHLCGYDSKPCNLSSTAVLESQEKGSSKPGVPGKFKFLFALALLGCSLVFATLAIIKSRKTRKHSNSWKLTAFQKLEYGSEDIIGCIKESNVIGRGGSGVVYRGTMPKGEEVAVKKLLGINKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNWDKEMVMKILDERLHHIPLAEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAKKNSSLPDFLVD 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12498g00001 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 374 661 - -
Mupr12498g00001 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 702 810 - -
Mupr12498g00001 1020 Gene3D Ribonuclease Inhibitor 223 318 IPR032675 -
Mupr12498g00001 1020 SMART serkin_6 733 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12498g00001 1020 SUPERFAMILY L domain-like 396 655 - -
Mupr12498g00001 1020 Gene3D Transferase(Phosphotransferase) domain 1 811 1015 - -
Mupr12498g00001 1020 FunFam Uncharacterized protein 60 218 - -
Mupr12498g00001 1020 SUPERFAMILY RNI-like 111 455 - -
Mupr12498g00001 1020 Gene3D Ribonuclease Inhibitor 60 222 IPR032675 -
Mupr12498g00001 1020 ProSiteProfiles Protein kinase domain profile. 733 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12498g00001 1020 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Mupr12498g00001 1020 Gene3D Ribonuclease Inhibitor 319 395 IPR032675 -
Mupr12498g00001 1020 SMART LRR_typ_2 177 201 IPR003591 -
Mupr12498g00001 1020 SMART LRR_typ_2 395 417 IPR003591 -
Mupr12498g00001 1020 SMART LRR_typ_2 370 394 IPR003591 -
Mupr12498g00001 1020 SMART LRR_typ_2 298 322 IPR003591 -
Mupr12498g00001 1020 SMART LRR_typ_2 516 540 IPR003591 -
Mupr12498g00001 1020 SMART LRR_typ_2 225 248 IPR003591 -
Mupr12498g00001 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Mupr12498g00001 1020 SUPERFAMILY Protein kinase-like (PK-like) 727 1005 IPR011009 -
Mupr12498g00001 1020 Gene3D Ribonuclease Inhibitor 396 661 IPR032675 -
Mupr12498g00001 1020 Gene3D Phosphorylase Kinase; domain 1 701 810 - -
Mupr12498g00001 1020 Pfam Protein tyrosine and serine/threonine kinase 735 1005 IPR001245 GO:0004672|GO:0006468
Mupr12498g00001 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 108 233 - -
Mupr12498g00001 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 262 367 - -
Mupr12498g00001 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 811 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12498g00001 Mupr-Chr12498 7744 15134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12498g00001 78 1010 Receptor kinase-like Gene Family AT5G65700 58.120 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr12498g00001 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12498g00001 - - gmx:100803075 1810.42