Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12497g00003 ATGGATAACATTGTATTAAAGCTGACTAGTTTATACACCTTGCTTCTTTTACTTTTTCTATCTTATAAGCCTGCTCTTTCATTTTCTTCTAGACATAGCCAATATTGGGGTGGTGAGAGGATATTGAGCTCTGGTGATAATGGTGATCTTGTCACTAACTTGCCTGGTCAGCCTCGTGTGGATTTCCAGCACTATGCTGGATATGTCACGGTCAATGAAACCAATGGACGAGCACTCTTTTACTGGTTCTATGAGGCTATCACCAAGCCAGAAGATAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACAGATGGCCATGGCCTCAAATTTAATAACTTCTCTTGGAACAAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCGTACTCAAATACAAGCAGGGACTATGATCAATTGGGAGATGACCTCACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTCCTAAAGTTTCCATCATATAGAACGAAGACAATTTACATAGCAGGGGAGAGCTATGCGGGAAAGTATGTACCCGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATCGATCTCAAGGGTATTCTGCTTGGTAACCCTGAAACATCTGATGCTGAGGACTGGATGGGTTTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAGACTCATCAAATAATAAAAACGAGTTGCGACTTTAACAGCAGTGATCCATGGCGCAATGAAGATTGTAGTCAAGCTGTGGATGAAGTACTCAAACAATACAACCAAATTGATATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCACGTTCAGAAGATCAATCCACGCAAACTTCCATGAAGCTTTCATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCATGCCTTGATGACTATGCGAAAACTTTTTATAATAAACCAGATGTTCAGAAGGCTCTCCATGCCAGCGATGGTCACAATCTAAAGAATTGGAGCATTTGCAACAACAAGATATTCTATGACTGGGCCGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTACCAGTGCTGTCCACAAGGTACAGCTTAGGCTCTCTTGCATTGCCTGTCACTAAATCATGGAGGCCTTGGTACCATGAAAATGAGGTTAGCGGGTGGTTTGAAGAATATGAGGGGCTAACATTTGCAACATTTAGAGGAGCGGGCCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATGA 1452 0.4291 MDNIVLKLTSLYTLLLLLFLSYKPALSFSSRHSQYWGGERILSSGDNGDLVTNLPGQPRVDFQHYAGYVTVNETNGRALFYWFYEAITKPEDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGHGLKFNNFSWNKEANMLFLESPVGVGFSYSNTSRDYDQLGDDLTANDAYSFLHNWFLKFPSYRTKTIYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHQIIKTSCDFNSSDPWRNEDCSQAVDEVLKQYNQIDIYSLYTSVCFASTARSEDQSTQTSMKLSSKMMPRMLGGYDPCLDDYAKTFYNKPDVQKALHASDGHNLKNWSICNNKIFYDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLGSLALPVTKSWRPWYHENEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12497g00003 483 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Mupr12497g00003 483 Gene3D - 382 476 - -
Mupr12497g00003 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 463 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 Gene3D alpha/beta hydrolase 46 304 IPR029058 -
Mupr12497g00003 483 Gene3D - 335 371 - -
Mupr12497g00003 483 Pfam Serine carboxypeptidase 56 476 IPR001563 GO:0004185|GO:0006508
Mupr12497g00003 483 FunFam Carboxypeptidase 45 304 - -
Mupr12497g00003 483 FunFam Carboxypeptidase 382 476 - -
Mupr12497g00003 483 SUPERFAMILY alpha/beta-Hydrolases 47 477 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12497g00003 Mupr-Chr12497 4559 7911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12497g00003 340 477 Calmodulin-binding Proteins AT2G22960 35.252 1.45e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12497g00003 K16297 - gmx:100815993 913.679