Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12496g00002 ATGGGAACCCCAGAAGAAGAAGAAGAAGAGGTTCTCAAGAAGATAGAACGCTTAGAAGCTGGTCACGCTCACCTCAAGCAAGAAATGTCCAACCTCAAGCTCATCCACAACCGCAGGTCTCGTTCCAGGTTGGCTTCTGCCACGTGTAACAAACACTCTTCTTCTTCTTCACTGCATCATTATAATGAAACCAAGTATCTCAACATCTTGCAGTCAATGGGCCATTCTGTTCATGTATTGGATCTTCAATGCCGTGTCATGAACCCTAGTGCTGAGAATCTGTATGGTTATGCAGCAGAAGAAGTTCTTGGGCAGGATGGGATTGAGATGCTTGTGGATCCCAGGGATTTTGGCTTGGCCAATGATGTGTTCAACAGTGTCAAAATGGGAGAGAGTTGGAGGGGTCAGTTTCCTGTGAAGAATAAGAAAGGGGATAGATTCTATGCTGTGGCAACCAATACACCTTTCTATGGTGATGATGGAAACTTGGTTGGGGTTATTTGTGTCTCCTATGATTCAAGGCCCTTTCTTGAAACCAGAATTCCCTCTTCAGTGGCAGAGAAGGTGGAGCCGGATTTGGGTTCTAACAGTCTTAGGAATAGCATTACAGATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTGGCGTCGAAAATTTCAAATTTGGCATCGAAGGTGAGTAACAAAGTTAAGTCTAGAATGCGGATGGGAGAAAATAATGTCAATCATGAAGGTGGGAGCAGAGAAAGTCATCATTCTGAGCATGGTTTCTCAGACTGCATTCTTTCTGACCAGAGAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGAAGAGGTGCTAAAATCTCCTTTTGGTGTATTTTCTCATGTTGAAGAGAAATCCCAAGGAAAAACTACAAGAGACTCAGGTGATCAGAGTGAAGGAAAACCTATTCACAAGATCATAACTACTAAAGCTGAAACATGGATTCAAAAAAAGACATCATCATGGCCATGGAGAGCAAATGATCAAGAGGGATCCGAGGCAAGGAATGTTCATGTTGCTTGGCCTTGGTTGCAGGGTGATCAAGAGAATGAGTCAATTAATCAGAAAAATCCTTCTTCTGAGTTGAAGCCAGAAAGCCAGGCAGGCGAAAGTAGCCGACCTGTTAATAATGAGGCTTCAGGATCCTGGTCCTCTTTTTTTAATGTTAACAGCGCGAGTAGTACCAGCAGCTGTGGGAGTGTCAGCAGTTGTCCTGGCAATAATAAAGTGGATGTTGACTCTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACCAATCGGGCAAGGTTCTTGTGGAACTGTATATCACGCTCTGTGGTATGGATCGGATGTTGCTGTCAAGGTTTTCTCAAGGCAAGAATACTCAGAAGATGTGTTACTGGCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGTCACCCAAATATTATTCTCTTTATGGGGGCTGTGACTTCACCTCAACGTCTATGCATTGTAACAGAGTTTCTCCCACGCGGAAGCTTGTTTCGTTTGCTTCAGAGAAACACATCCAAACTTGAGTGGAGACGGCGAGCTCATATGGCCTTAGATATTGCACGAGGTGTAAATTATCTTCATCGATGCAACCCTCCTATCATACATCGAGATTTGAAGTCTTCAAATATTCTAGTTGATAAGAATTGGACTGTGAAGGTCGGTGATTTTGGTCTTTCGCGTCTTAAGCACGAAACATATCTCACTACTAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACTGTCAGATGAGAAGTCTGATGTTTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACTGAAAAGATCCCTTGGGATACTCTCAACCCAATGCAGGTTATTGGAGCTGTAGGGTTTATGAACCATCGGCTAGAAATTCCAGAAGATGTTGATCCACAGTGGGCTTCTATAATTGAGAACTGCTGGCACAGTGATCCAGCTTGCCGACCAACATTCCAGGAACTGGTGGAAAGGCTTAGAGAACTGCAGAGACGGTATACAATTCAATTCCAGGCAGCTCGATCCGCTGTGGAGGAAGGCACTCAAAAGGAGTTGTGCTGA 2157 0.4437 MGTPEEEEEEVLKKIERLEAGHAHLKQEMSNLKLIHNRRSRSRLASATCNKHSSSSSLHHYNETKYLNILQSMGHSVHVLDLQCRVMNPSAENLYGYAAEEVLGQDGIEMLVDPRDFGLANDVFNSVKMGESWRGQFPVKNKKGDRFYAVATNTPFYGDDGNLVGVICVSYDSRPFLETRIPSSVAEKVEPDLGSNSLRNSITDKLGLDSQQPLQVALASKISNLASKVSNKVKSRMRMGENNVNHEGGSRESHHSEHGFSDCILSDQREDGNSSGASTPREEVLKSPFGVFSHVEEKSQGKTTRDSGDQSEGKPIHKIITTKAETWIQKKTSSWPWRANDQEGSEARNVHVAWPWLQGDQENESINQKNPSSELKPESQAGESSRPVNNEASGSWSSFFNVNSASSTSSCGSVSSCPGNNKVDVDSDCLDYEILWEDLTIGEPIGQGSCGTVYHALWYGSDVAVKVFSRQEYSEDVLLAFRQEVSVMKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLEWRRRAHMALDIARGVNYLHRCNPPIIHRDLKSSNILVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNELSDEKSDVYSFGVILWELATEKIPWDTLNPMQVIGAVGFMNHRLEIPEDVDPQWASIIENCWHSDPACRPTFQELVERLRELQRRYTIQFQAARSAVEEGTQKELC 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12496g00002 718 FunFam PAS domain-containing protein tyrosine kinase 432 516 - -
Mupr12496g00002 718 FunFam PAS domain-containing protein tyrosine kinase family protein 517 708 - -
Mupr12496g00002 718 Pfam PAS fold 87 169 IPR013655 GO:0005515
Mupr12496g00002 718 Gene3D Phosphorylase Kinase; domain 1 432 516 - -
Mupr12496g00002 718 ProSiteProfiles Protein kinase domain profile. 439 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12496g00002 718 CDD STKc_MAP3K-like 445 691 - -
Mupr12496g00002 718 MobiDBLite consensus disorder prediction 239 265 - -
Mupr12496g00002 718 MobiDBLite consensus disorder prediction 267 281 - -
Mupr12496g00002 718 ProSiteProfiles PAS repeat profile. 88 131 IPR000014 -
Mupr12496g00002 718 SMART serkin_6 439 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12496g00002 718 MobiDBLite consensus disorder prediction 363 390 - -
Mupr12496g00002 718 SUPERFAMILY PYP-like sensor domain (PAS domain) 68 169 IPR035965 -
Mupr12496g00002 718 NCBIfam PAS domain S-box protein 63 170 IPR000014 -
Mupr12496g00002 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Mupr12496g00002 718 Pfam Protein tyrosine and serine/threonine kinase 439 691 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 PRINTS Tyrosine kinase catalytic domain signature 618 640 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 PRINTS Tyrosine kinase catalytic domain signature 599 609 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 PRINTS Tyrosine kinase catalytic domain signature 513 526 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 PRINTS Tyrosine kinase catalytic domain signature 662 684 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 PRINTS Tyrosine kinase catalytic domain signature 552 570 IPR001245 GO:0004672|GO:0006468
Mupr12496g00002 718 MobiDBLite consensus disorder prediction 298 319 - -
Mupr12496g00002 718 CDD PAS 77 172 IPR000014 -
Mupr12496g00002 718 Coils Coil 8 35 - -
Mupr12496g00002 718 MobiDBLite consensus disorder prediction 230 325 - -
Mupr12496g00002 718 SMART pas_2 64 129 IPR000014 -
Mupr12496g00002 718 Gene3D PAS domain 76 174 - -
Mupr12496g00002 718 Gene3D Transferase(Phosphotransferase) domain 1 517 717 - -
Mupr12496g00002 718 SUPERFAMILY Protein kinase-like (PK-like) 428 691 IPR011009 -
Mupr12496g00002 718 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 228 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12496g00002 Mupr-Chr12496 6504 12638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12496g00002 9 713 MAP Kinase Kinase Kinase AT3G06620 57.461 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mupr12496g00002 PK_Tyr_Ser-Thr 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12496g00002 - - gmx:100815858 1188.71