Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12496g00001 ATGTTACTGTTAAGAGAAAGAAATTTACAGTTGATTCGTGATATTCCTGAAGAAATCAAGACATTGGCTGTTTATGGTGATCAATTGAGGATTCAACAAGTGTTGGCTGATTTCTTATTGAATATGGTGCGCTATGCACCCTCTCCAGATGGCTGGGTAGAGATTCTTGTACATCCAAGACTAAAACAAATCTCGGATGGGCTCACTCTTCTCCATGCTGAATTTAGGATGGTATGTCCTGGTGAAGGTCTTCCTCCTGAATTGATTCAAGACATGTTCAATAACAGTCGGTGGGTGACTCAAGAAGGTTTAGGACTGAGCATGAGCAGGAAGATTCTAAAGCTAATGAATGGCGAAGTCCAGTATATCAGGGAGGCAGAGCGGTGCTACTTTTTTGTTCTTCTTGAACTACCAGTGACACGGAGAAGCTCTAAAAAAGTAGATGAAATGCTGTGTCGCCAAATATGCACACATCTTCATGGCCAAGTGGAGTGTCCTGTGAAAATTTTCAAGCAAATGCTTACATCATTAGCAGCTGCTGCATGCAAAGTAATGTCAACTACAAGTTTGAAGAATGGATTTGATCAAACGTATACTAATGAGTCTAAAGCATACATAAAACATGGTAGGCAACTTGATTTCATAGACAACTCTTGGAGAGAGAAAATGGACAAATGTGATGATCTCATTGAAGATATAAATTATATAGTATGGGATGAGTATGAT 726 0.3926 MLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLLNMVRYAPSPDGWVEILVHPRLKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWVTQEGLGLSMSRKILKLMNGEVQYIREAERCYFFVLLELPVTRRSSKKVDEMLCRQICTHLHGQVECPVKIFKQMLTSLAAAACKVMSTTSLKNGFDQTYTNESKAYIKHGRQLDFIDNSWREKMDKCDDLIEDINYIVWDEYD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12496g00001 242 Coils Coil 241 242 - -
Mupr12496g00001 242 FunFam Phytochrome 1 143 - -
Mupr12496g00001 242 SMART HKATPase_4 26 141 IPR003594 -
Mupr12496g00001 242 ProSiteProfiles Histidine kinase domain profile. 1 141 IPR005467 -
Mupr12496g00001 242 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4 137 IPR036890 -
Mupr12496g00001 242 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 133 IPR003594 -
Mupr12496g00001 242 Gene3D - 2 144 IPR036890 -
Mupr12496g00001 242 CDD HATPase_Phy-like 25 137 IPR044767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12496g00001 Mupr-Chr12496 1376 4184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12496g00001 1 139 Histidine Kinase Gene Family AT4G16250 64.748 1.13e-57 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12496g00001 K12121 - gmx:100799831 280.026