Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12490g00001 ATGCACAAGTTCGCTTATCTGCTTTGGTTTATCAACATGCATGTCATTGTACTTGGGAACACTGCAACTAATGAGAGTTCTAATGTTAAGGGCATAATAGGAGCTATTTTAGATAGCAGTTCTCGCATTGGCCAAGAGCATGCAGTGGCTATAAATCTGGCATTGGAAGACTTTAATCAAAAAAACAATCTGAGTTTTGCTCTGCATATAATTAACTCTCAAGGGGATCCTCTTTTGGCAGCTATTGCAGCTAGAGATCTCATTGATAATCAAAAGGTGCAAGCCATCATTGGACCACAAACATGGGCAGAGACATCTTTAGTGGCTGAAGTCTGCAGCCAAAAGAGCATACCCCTCCTTTCTCTATCAGAAACAACTCCAGAATGGGCAATGAAAAAGTGGCACTTCCTGCTGCAATCCTCGCCTAGCCAAATTATGCAGATGAAAGCTATAGCTGAAATTGTAAAGTCCTGGAAACTCTATAATGTTAGCATGATATATGAAGATGGAGACTCATCATCCACTGAAGTTTTATCTCAGCTCTCTGGAGCTCTCACAGAAGTTGGAAAAGAATTAAGCAATGTTCTAGCAATTCCACCTCTAGTTTCTTCTTCATTGTCCCAACAACTTGAGAAGCTACGAGAAGGACAATGTAGTGTCCTTATTGTCCATTTGTCCTTTCCTTTGGCACTACACCTGTTTGAAACTGCAAAAAGAATGAATATGATGGGGGGAGGTAATGTATGGATTACTACTGGCACCTTTTCAAGTCTTGTTTATTCCTTGAATGCATCCACTATCTCCAATATGCAAGGGATTGTTGGAGTCAAGAGCTATATCCCAAATCTATGGTACCAACATGCAAACTTCTACCATAGATTTCGGAAAAAATTTAGCTCAGAGAATTTTGAAGAGTTTAATTATGAGCCTGGGATCTTTGCAGCTCAGGCTTATGATGCTGCATGGATTGTGGTTGATGCAATGAGGGAAACCAACCAAAAAGGGGGTCAACTTTTGCTAGATAAGATTTTACATAGTAATTTTACTGGCTTAAGTGGAAAAATTCAGTTCACTGACCATAAAATAGCTCCAGCACATACTTTTCAAATCATTAATGTGATAGGGAGGAGCTTCAGGGAAATTGGGTTCTGGTCAGATGGACATGGTTTCTCGAAATCTTTGGATCAAAATGCTTCTTACAATTCTTTGGTGACGGAATTAGGAAAAGTAGTTAATCCAACATGTGCCATACGACTAAGAATTGGTGTCCCCTCCAGATCAACATTCAAACAGTATGTTAATGTTATTCGAGACAATTCTAAAAATGTTACTTCCTTCGAGGGATTTGCCATAGACCTTTTCGATGAAACAGTAAAAAAATTGCCATACCATCTGGAATATGATTATTTTGCCTATGATGGCGAGTATGATGAACTGGTGGAGCAAGTTTATTGGAAGAAATATGATGCAGTTGTCGGTGATGTAGTAATAGTGTCCAAGCGATATGAATATGTTTCATTCACTCAGCCCTATACTGATCCGGGAGTAGTGATGATTGTTCCTGTTAAATCAGAAACAGGCAACAGAGCGTGGCTATTCCTGAAGCCTTTCACAAAGCTCATGTGGGTTCTAATATTGGTCATCATTGTCTACAATGGCTTTGTTGTATGGTTGATTGAAAGAAACCACTGCCCTGAACTGAAGGGCCCTTTTCTGCATCAAACCACAACTATGCTGTGGTTGGCTTTCTGTTCTCTGTTCTCTTTGAATGGGGACAGGTTGCATAGCAATTTATCAAGGGTGGCAATGGTGGTTTGGCTTTTTGTGGCTCTAATCATTACACAGACTTACACTGCTAGCCTTGCCAGCATGTTGACTGTTGAACGGTTTGAACCAACTGTAGACAGCATTCAGCAGCTAAAGAAGAGTAATGCCACGGTAGGATATGATAGAGGATCCTACTTGAAAAGATATCTCCAGGATGCATTGGGCTTCAATGCTGAAAACATCAGGCAATTTGACTCACAGGAGAGCTATGTTGATGCCCTAAGAAACAAAACAATAGCAGCTGCCTTCCTTGATATCCCTGAGGCCAAAATCTTCCTTGCAAAGCACTGTAAAGGGTTTGTTCAAGCAGGGACTACATACAAAATTGGAGGATATGGATTTTTTCTCAGTAACTCTACTGCTATACATCAACACTAA 2205 0.4023 MHKFAYLLWFINMHVIVLGNTATNESSNVKGIIGAILDSSSRIGQEHAVAINLALEDFNQKNNLSFALHIINSQGDPLLAAIAARDLIDNQKVQAIIGPQTWAETSLVAEVCSQKSIPLLSLSETTPEWAMKKWHFLLQSSPSQIMQMKAIAEIVKSWKLYNVSMIYEDGDSSSTEVLSQLSGALTEVGKELSNVLAIPPLVSSSLSQQLEKLREGQCSVLIVHLSFPLALHLFETAKRMNMMGGGNVWITTGTFSSLVYSLNASTISNMQGIVGVKSYIPNLWYQHANFYHRFRKKFSSENFEEFNYEPGIFAAQAYDAAWIVVDAMRETNQKGGQLLLDKILHSNFTGLSGKIQFTDHKIAPAHTFQIINVIGRSFREIGFWSDGHGFSKSLDQNASYNSLVTELGKVVNPTCAIRLRIGVPSRSTFKQYVNVIRDNSKNVTSFEGFAIDLFDETVKKLPYHLEYDYFAYDGEYDELVEQVYWKKYDAVVGDVVIVSKRYEYVSFTQPYTDPGVVMIVPVKSETGNRAWLFLKPFTKLMWVLILVIIVYNGFVVWLIERNHCPELKGPFLHQTTTMLWLAFCSLFSLNGDRLHSNLSRVAMVVWLFVALIITQTYTASLASMLTVERFEPTVDSIQQLKKSNATVGYDRGSYLKRYLQDALGFNAENIRQFDSQESYVDALRNKTIAAAFLDIPEAKIFLAKHCKGFVQAGTTYKIGGYGFFLSNSTAIHQH 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12490g00001 734 CDD GluR_Plant 418 723 - -
Mupr12490g00001 734 Gene3D - 143 386 - -
Mupr12490g00001 734 Gene3D - 34 365 - -
Mupr12490g00001 734 Pfam Receptor family ligand binding region 49 374 IPR001828 -
Mupr12490g00001 734 FunFam Glutamate receptor 147 308 - -
Mupr12490g00001 734 CDD PBP1_GABAb_receptor_plant 33 394 IPR044440 -
Mupr12490g00001 734 SUPERFAMILY Periplasmic binding protein-like I 32 389 IPR028082 -
Mupr12490g00001 734 SMART GluR_14 418 734 IPR001320 GO:0015276|GO:0016020
Mupr12490g00001 734 FunFam Glutamate receptor 415 529 - -
Mupr12490g00001 734 Pfam Bacterial extracellular solute-binding proteins, family 3 445 726 IPR001638 -
Mupr12490g00001 734 SUPERFAMILY Periplasmic binding protein-like II 419 726 - -
Mupr12490g00001 734 Pfam Ligand-gated ion channel 541 680 IPR001320 GO:0015276|GO:0016020
Mupr12490g00001 734 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 725 IPR015683 -
Mupr12490g00001 734 Gene3D - 532 655 - -
Mupr12490g00001 734 Gene3D - 400 531 - -
Mupr12490g00001 734 FunFam Glutamate receptor 530 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12490g00001 Mupr-Chr12490 4382 9360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12490g00001 7 723 Ion Channels AT5G27100 31.711 7.36e-121 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12490g00001 - - gmx:100818623 1239.17