LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12486g00002	ATGGAAAGAGGAAGTGTTTCAAGTTCAAGTAAGTCACAAACTGATGTCATAAAGGAAATGTCTTCCAATGAGGGCATAAAGGATGGGAATGAAGAAACATCAGAGCAAGGTCTCCAAAAATTGGTACAATATAAGGAGGAAGTTGAAGAGCCTAAAGTTGGGATGACTTTCTCTTCTGAGCAGGAGATTTTCAATTATTACACTAATTTTGCTCAGCAGAAGGGTTTCGAAGTGTATAGAAGAACTTCAAAAATGGAAGAAGATGGGAAGAAATATTTTACACTTGCTTGTGTTTGTTCCAGGAGGTCAGAAAGCAAGCGAAGGCATCTTCTAAGTCCATATCTTCTTACAAAAACCCAGTGTAAAGCAAGAATTAATGCGTGTTTATGTCTAGATGGAAATATCAGAGTTTTGAGTGTTGCACTTGAGCATAACCATGAGCTGTATCCAGGAAAAGCACGGCTTGTTAAATATACTAAAAAGTTTAAGGCTCAAAGAAAAAGGAAACATGATCTTAGCAATCTGGTTGAGATCAATGGGGATGGAAGTATCCAATCTCTAGCTGGAGAACATGGAAGCCTTGGATTTTTTGATAAAAATCGTAGGGCCTTTATTCAGAAAGCTAGCAGCCTAAGATTTGAGAGTGGAGATGCTGAAGCTATTCAAAGCTATTTTGTTCAAATGCAAAAGAAAAATAGTGGCTTCTATTATGTGATGGACTTGGACGATGACTGCCGACTAAGAAATGTTTTTTGGGTAGACGCAAGAAGTAAGGCTGCAAGTGAATATTTTGGAGATGTTGTAACTTTGGACACCACATATCTAACAAACAAATACAACATACCTCTTGCTCTTTTTTCAGGAGTGAATCACCATGGACAATCAGTATTACTAGGTTGTGCTTTGTTGTCAAATGAAGATGCTGAAACTTTTACATGGTTATTTCAGACATGGCTGGCATGTATGTCTGGACATGCGCCGAATGCCATCATCACAAGTGAAGATAAAGCAATAAAAACTGCAATTGAGATTGTATTCCCAAAAGCTCGTCATCGATGGTGTTTGTGGCACATAATGGAAAGGGTAACTGAAAATTTGAGAGAATATCCTCAGTTTGAGTCTATCAAAACAGATTTGCATGGTGCAGTTTATGATTCTTTTTGTAAAGATGCTTTCAATGAAAGTTGGAAAAAAGTAATTTGTAGTTATAACCTTCGTGACAACGAATGGTTGAATAGTCTATATAATGAGCGCCAACATTGGGTTCCTGTATATGTCAAAGACACATTTTGGGCTGGAATGTCTACAATAGATAGAAATGAAAGTGTGCATGCATTTTTTGATGGATATGTTTACTCAAAGACTGGTTTAAAGCAGTTTTTTAAGCAGTTTGACAATGCTATGAAAGATAAAGTTGAGAAAGAGTGCTTGGCAGATTTTAGTTCCTTTAATAATTTAATCCCTTGTAGAAGCCATTTTGGCATTGAGAACCAATTTCAAAAAGTTTATACCAATGAAAAATTCAAAGAGTTTCAAGAAGAGATAGCTTGTATCATGTATTGCAATGCTGCCTTTGAGAAGAAAGAAGGCTTGGTTTCAGTATATTCTGTTGTTGAGAGTATTTTATGCAGACATATTCTTTCTTTGCTCAAGCTCATAAGGAAAACAGAGTCAGTGCCACATAAGTATGTTTTCTCGCATTGGAGGAAAGATTTGAAGCGGAAACACACATTAGTCAGATGTAGTTACGGTGATTTGATTGCTAATCCTGAAGCAGAACGACTTGATAAGATGTGCAATGCTTTTCATGAAGTTGCATGTATGGGGTTAAATACTGATGTTGATTTCTTGAAAGTGATGAAATGGATTGATGGCTTAAAAGTTGAATTAAGTTGTAAAAAGATTTCTTCTGGATTAACTGAAACACTGCCTATTGCATCAAATATGTCAATGATTTCTGATGAAACTGAGGAAAGAAGGTATCACAGACAGTCATGCAGTCAATCTGTCACTGGAGACGTGTCTCAGTTTGTCCCATTCCAATATTTTACCCAACTCATCATAATGAATGAATACAAATTCAAGTACACCGGAAGCACCCAGAAGAGCTCCCCAAGCACTGGCAGTTGGTTCCATAGGCATTCTCTGTATAAACTTGTAAGCCTCATCAAGGCGGCCGGCACGACTGAAGACATCAACCATACATGCATAGTGATTAGCATCAGACTTCAAATCCTTCAATTCCGAGCAAGCGGGCAAAATGCTAGACACAGTCACCGAATTCGGCTTCACCCCATTCCAACCCATTTCGCGAAAAACAGCCAGGCCTCTCCTAGGCAATCCACAACTAACATAGCAAGAGGACAACGAGGTCCAAGAAACCACATCTTTCACGACCAAATCATCAAAAACCCGCCTTGCACCTTCTATGCATTTACACTTCCCATAGGCATGAATCAATGCATTGCCCAAGAAAGCATCAGACATCACCCCACATCGAATGGCATCATCATGAACCTCCTTGACTCTCAAGGCATCACCAGAGGCACCACAGGCCTTGGCAACAGCCAGAAACACCAAGTTGTGGGGTTTGATCCCACGTGTCCGCAGCGAAGCATAGAGCCTTATGGCCTCATTTGGAAGTCCATGAGTGGTGAAAGCTGA	2664	0.3919	MERGSVSSSSKSQTDVIKEMSSNEGIKDGNEETSEQGLQKLVQYKEEVEEPKVGMTFSSEQEIFNYYTNFAQQKGFEVYRRTSKMEEDGKKYFTLACVCSRRSESKRRHLLSPYLLTKTQCKARINACLCLDGNIRVLSVALEHNHELYPGKARLVKYTKKFKAQRKRKHDLSNLVEINGDGSIQSLAGEHGSLGFFDKNRRAFIQKASSLRFESGDAEAIQSYFVQMQKKNSGFYYVMDLDDDCRLRNVFWVDARSKAASEYFGDVVTLDTTYLTNKYNIPLALFSGVNHHGQSVLLGCALLSNEDAETFTWLFQTWLACMSGHAPNAIITSEDKAIKTAIEIVFPKARHRWCLWHIMERVTENLREYPQFESIKTDLHGAVYDSFCKDAFNESWKKVICSYNLRDNEWLNSLYNERQHWVPVYVKDTFWAGMSTIDRNESVHAFFDGYVYSKTGLKQFFKQFDNAMKDKVEKECLADFSSFNNLIPCRSHFGIENQFQKVYTNEKFKEFQEEIACIMYCNAAFEKKEGLVSVYSVVESILCRHILSLLKLIRKTESVPHKYVFSHWRKDLKRKHTLVRCSYGDLIANPEAERLDKMCNAFHEVACMGLNTDVDFLKVMKWIDGLKVELSCKKISSGLTETLPIASNMSMISDETEERRYHRQSCSQSVTGDVSQFVPFQYFTQLIIMNEYKFKYTGSTQKSSPSTGSWFHRHSLYKLVSLIKAAGTTEDINHTCIVISIRLQILQFRASGQNARHSHRIRLHPIPTHFAKNSQASPRQSTTNIARGQRGPRNHIFHDQIIKNPPCTFYAFTLPIGMNQCIAQESIRHHPTSNGIIMNLLDSQGITRGTTGLGNSQKHQVVGFDPTCPQRSIEPYGLIWKSMSGES	887

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12486g00002	887	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	45	594	IPR031052	GO:0006355
	Mupr12486g00002	887	MobiDBLite	consensus disorder prediction	1	20	-	-
	Mupr12486g00002	887	MobiDBLite	consensus disorder prediction	1	38	-	-
	Mupr12486g00002	887	MobiDBLite	consensus disorder prediction	771	789	-	-
	Mupr12486g00002	887	Pfam	FAR1 DNA-binding domain	65	149	IPR004330	-
	Mupr12486g00002	887	MobiDBLite	consensus disorder prediction	771	793	-	-
	Mupr12486g00002	887	Pfam	MULE transposase domain	267	360	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12486g00002	Mupr-Chr12486	8143	14098	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Mupr12486g00002		MULE	7.9e-34	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12486g00002	-		-	gmx:100813525	1136.71