Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12473g00001 ATGGATGAGAAGGAGAATAAGAATAAGAATACTATAATAGCATATAAACTTGTATGCGGCAGTTCTTATGGGCAGAACCTAGAAACTAGCACTTTTATTGGAGAAACATCATTTGCTATTGTCATTGCCATCGTGGGTCTTGTATTATTTTCCCATTTGATTGGAAACATGCAGACATATTTGCAATCAATTACTATAAGGCTTGAGGAGTGGAGGCTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGCCAACTCCCTGAAGATTTGAAAAGTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCTACTCGTGGAGTTGATGAGGAAACTATTCTACGTGCATTGCCTGCTGATCTTCGCCGAGATATCCAACGCCACCTGTGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCACAGATGGATGATCAGCTTCTGGATGCAATATGTGAGCGGCTGGTATCGTCTCTCAGCACTCAAGGCACGTACATTGTTCGTGAGGGTGACCCCGTGACTGAAATGCTTTTTATCATTAGAGGTAGACTGGATAGTTCAACTACAAATGGTGGACGGACTGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGCGAGGAACTACTTTCTTGGGCTTTACTCCCAAAATCAACAATTAATTTGCCTTCTTCGACTAGGACAGTTAAAGCCCTAAGTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGACCTCAAGTTTGTTGCTAATCAATTTAGGCGCCTCCACAGTAAGAAGCTGCAGCATACCTTTCGATTTTACTCCCACCATTGGAGGACTTGGGCAGCCTGCTTTATACAGGCTGCTTTTCGCCGATATAAGAAAAGGATGTCTTTGAAAGACCTCAGTTTGAGGGAATCCATTCCTTTAGACGAGACAGTAGCTGGTGAGAAAGAACAAGAGGACTATTCCGCTGGTTCAAATTCATCTCAGGCCAAATTGAACCTTGGGGCTACAATTCTTGCTTCGAGATTTGCTGCTAACACACGGAGAGGAGCTCTGAAGATTAAAGATGACATGCCCCAGTTACAGAAGCCTGAAGAACCTGATTTTTCCACTGAAGCCGATGACGATTAG 1128 0.4335 MDEKENKNKNTIIAYKLVCGSSYGQNLETSTFIGETSFAIVIAIVGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLKSRVRRFVQYKWLATRGVDEETILRALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAFRRYKKRMSLKDLSLRESIPLDETVAGEKEQEDYSAGSNSSQAKLNLGATILASRFAANTRRGALKIKDDMPQLQKPEEPDFSTEADDD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12473g00001 375 Gene3D Jelly Rolls 138 258 IPR014710 -
Mupr12473g00001 375 CDD CAP_ED 140 271 IPR000595 -
Mupr12473g00001 375 Pfam Cyclic nucleotide-binding domain 163 251 IPR000595 -
Mupr12473g00001 375 ProSiteProfiles cAMP/cGMP binding motif profile. 140 270 IPR000595 -
Mupr12473g00001 375 SUPERFAMILY cAMP-binding domain-like 70 262 IPR018490 -
Mupr12473g00001 375 MobiDBLite consensus disorder prediction 353 375 - -
Mupr12473g00001 375 FunFam Cyclic nucleotide-gated ion channel 1 138 256 - -
Mupr12473g00001 375 FunFam Cyclic nucleotide-gated ion channel 1 67 131 - -
Mupr12473g00001 375 Gene3D Helix hairpin bin 68 131 - -
Mupr12473g00001 375 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 21 368 - -
Mupr12473g00001 375 SMART cnmp_10 140 271 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12473g00001 Mupr-Chr12473 1929 4203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12473g00001 21 374 Ion Channels AT4G30360 76.880 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12473g00001 K05391 - gmx:100808425 683.33