Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12471g00001 ATGTTGTTGTTATTTCCAACGCTTCTGTCCATGAAGCTCCAATCATTTTGTCTGCTTCTTGTAATGTGCTTTTGTGCATTTGTAATAGCCTCTTCTTCTAATGATGCTGCTTCTTCTGAGATTGCTTCCTTTGCTTCAGCAACACTAGAAAGCAAAGAAGCAAATGCTTTGTTGAAGTGGAAAGCCAACCTTGACAACCAAAGTCAAGCTTCTCTCTCTTCATGGACTGGCAACAATCCTTGTAATTGGCTGGGAATTGCATGTGATCAGTCCAATTCTGTTTCCAACATAAATCTTACAAATATTGGATTAAGAGGTACGCTTCAAAGTCTCGACTTCTCATTACTTCCAAACATCCTCACTCTAGTTATAAGTAACAACTCTTTGAATGGAAGTATTCCTCCTCAAATTGGAGTGTTGTCCAATCTGGGCACTCTTGATTTGTCCATTAATAAACTTTCCGGTAGCATTCCCAATACCATTGCTAATTTGTCCAAACTTTCATATCTTAATCTTCATACAAATGGTCTCTCTGGGACTGTTCCTTCCGAAATAACACAGTTGATTGGCCTTCAAACATTGATACTGAGTGGTAATATTTTCAGTGGATCGGTTCCTCAAGAAATAGGTAGATTGAGGAATCTGAGAATACTTGATATTTCTTCGTCCAATCTCACAGGGATTATCCCAACCTCAATCGAAAAGTTAAACAATTTGTCTTATCTAAATGTAGGAGGCAACAACCTTTATGGCAACATTCCTCTGAGAGTTTGGCACATGGACCTAAAGTATTTTTCACTTGGATTTAATCACTTCAATGGTTCTATCCCCAAAGAAATTGTGAGTATGAGGAACCTAGTGACTCTATATCTTCAAGAAAGTGGCCTTTCTGGCTCCATGCCCGAAGAAATTGGGATGTTGGCAAATCTAATAGAGCTTGACATTAGCAACTGTAATCTTACTGGATCCATCCCTGTTTCAATAGGAGCACTGGCCAATATATCAGATCTCAGGTTACACAACAACCAACTTTTTGGTCAAATTCCTCGTGAAATTGGCAAGTTGGTTAACCTCAAGGTTCTAGATCTTGGAAACAATGATCTTTCTGGCTCCATTCCTTATGAGATTCAATTTTTGAAACAACTCGAGCAACTTGATTTGTCTGATAACCTTCTCTCAGGTAAAATCCCCCCTTCAATTGGAAACTTGAGCAATTTATATTATCTTTACCTTTATAGCAACAATTTCTCTGGTTCTATTCCTGATCAAGTGGGAAATCTCCATTCACTTTTCACAATCCAATTGTCAAGCAACAACCTGTCGGGACCAATCCCGGCTTCCATAACTAACATGGTCAATTTAGATTCTATTCGCCTTGATAACAATAAACTCTCTGGATTCATTCCTTCTACCATCGGAAATTTGTCAAAGCTTACTGTATTAGATCTATACTTCAATGAGCTCAGTGGATCAATTCCCTCCACTATTGGAAATTTAACAAATGTCATAATATTATCATTAATGAGAAATGATCTTAGTGGCAAGATTCCAATAGAAATGAACAGAATTACTGATTTTGAAGGTTTGCAATTGGCTGATAATAATTTTATAGGCCACTTACCTCACAACATTTGCATTGGTGGAAAGTTGACATATTTTTCCGCTAGTAATAACAATTTCAATGGCCCAATTCCGGAGAGTTTGAAGAATTGCTTTAGCCTTATAAGACTCAGGCTTCAGCAAAACCAACTAACTGGGGATATAACAGATGCTTTTGGTGTACTTCCAAACTTGGACTACATTGAATTGAGTGAAAATAATTTTTATGGTCACCTTTCACCTAACTGGGGAAAGTTCCATAACCTAACAAGCCTCAAGATCTCCAACAATAATTTATCAGGTGTTATACCAACAGAACTAGGTGGGGCAACCAACTTACATGTACTTGACCTATCCTCAAACCATATTACAGGAAACATTCCACAAGATTTATGTAACTTGACCCACCTGTTTGATCTCTCAATCAGCAACAACAATCTTTCAGGAAATGTTCCCATAGAAGTAGCATCATTGCAAAATCTTCAAATATTGAATCTTGGGTCAAATGATTTGTCTGGCTTAATCCCAAAACAACTTGGAAATTTGCTCAATTTATTGAACATGAATTTGAGCGAAAATAAACTCGAGGGAAATATTCCTTCGGATCTTGGCAAATTGAAATTTCTTACAAGTCTTGATCTCAGTGGAAATTTTTTGAGTGGAACAATACCACCAATGCTTGGTGAAATGAAAAGCTTAGAAACATTGAATCTCTCACACAATAATCTTTCGGGTGATCTCTCTAGCTTTGATGATATGATAAGCTTGACATCTGTTGATATATCATACAACCAGTTCGTGGGTCCACTTCCAAACATTCTAGCCTTCCACAATGCTACAATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCACTGGCTTGGAGCCTTGCCCAACATTGAGTGGGAGGAAATCTCATAATCATATGAGAAAGAAAGTCATAATGCTAGTTTTATCTGTTACTTTGGGCACTCTAATACTGGCATTATTTGCTTTTGGAGTCTCGTACCATTTATGCCAAACTTCAAAGAAAAAAGAAGACCATGCTACAAATTTAAGAACTCCAAATACATTTGCAATATGGAGTTTTGATGGTAAAATGACATTCGAGAATATTATTGAAGCCACGGAACATTTTGACAACAAACATCTCATTGGGGTTGGAGGTGAAGGATGTGTATACAAAGCAATGTTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTTCAAATGGAGAAATGCTCAATCTGAAAGCTTTCACAAATGAGATCCAAGCTTTGACAAAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTATGGTGTGTGAATTCGTGGAGAAGGGCGATGTTGAGAAGATTTTGAAGGATGATGAACAAGCAATTGCATTTGATTGGAATAAAAGGGTGAATGTCGTTAAAGGTGTAGCAAATGCCTTGTTCTATATGCACCATGATTGTTCACCTCCAATTGTTCATCGGGATATATCAAGCAAGAATGTTCTTTTGGATTCAGAATATGTAGCTCATGTCTCAGACTTTGGAACATCTAAGTTTCTTAATCCAAATTCATCCAATTGGACCTCATTTGTCGGAACCTTCGGATATGCTGCTCCAGAACTTGCATACACGATGGAGGTAAATGAGAAATGTGACGTGTATAGTTTTGGGGTTCTAGCATGGGAAATACTTTTAGGAAAGCACCCTGGTGATGTTATATCTTCTTTATTGTTATCATCTTCATCCACTAGTGTGGCCTCAACACTTGATAATATGCCACTGATGGATAAGTTGGACCAACGTCTTCCTCATCCAACAAGCACTATTGTTAAGGAAGTGGTATCAGTTGCGAAGATAGCAATTGCATGCTTGACTGAAAGCCCACGATCTCGCCCTACCATGGAGCAGGTTGCCAAGGAGCTTGTGAACTGA 3576 0.3781 MLLLFPTLLSMKLQSFCLLLVMCFCAFVIASSSNDAASSEIASFASATLESKEANALLKWKANLDNQSQASLSSWTGNNPCNWLGIACDQSNSVSNINLTNIGLRGTLQSLDFSLLPNILTLVISNNSLNGSIPPQIGVLSNLGTLDLSINKLSGSIPNTIANLSKLSYLNLHTNGLSGTVPSEITQLIGLQTLILSGNIFSGSVPQEIGRLRNLRILDISSSNLTGIIPTSIEKLNNLSYLNVGGNNLYGNIPLRVWHMDLKYFSLGFNHFNGSIPKEIVSMRNLVTLYLQESGLSGSMPEEIGMLANLIELDISNCNLTGSIPVSIGALANISDLRLHNNQLFGQIPREIGKLVNLKVLDLGNNDLSGSIPYEIQFLKQLEQLDLSDNLLSGKIPPSIGNLSNLYYLYLYSNNFSGSIPDQVGNLHSLFTIQLSSNNLSGPIPASITNMVNLDSIRLDNNKLSGFIPSTIGNLSKLTVLDLYFNELSGSIPSTIGNLTNVIILSLMRNDLSGKIPIEMNRITDFEGLQLADNNFIGHLPHNICIGGKLTYFSASNNNFNGPIPESLKNCFSLIRLRLQQNQLTGDITDAFGVLPNLDYIELSENNFYGHLSPNWGKFHNLTSLKISNNNLSGVIPTELGGATNLHVLDLSSNHITGNIPQDLCNLTHLFDLSISNNNLSGNVPIEVASLQNLQILNLGSNDLSGLIPKQLGNLLNLLNMNLSENKLEGNIPSDLGKLKFLTSLDLSGNFLSGTIPPMLGEMKSLETLNLSHNNLSGDLSSFDDMISLTSVDISYNQFVGPLPNILAFHNATIEALRNNKGLCGNVTGLEPCPTLSGRKSHNHMRKKVIMLVLSVTLGTLILALFAFGVSYHLCQTSKKKEDHATNLRTPNTFAIWSFDGKMTFENIIEATEHFDNKHLIGVGGEGCVYKAMLPTGQVVAVKKLHSVSNGEMLNLKAFTNEIQALTKIRHRNIVKLYGFCSHSQFSFMVCEFVEKGDVEKILKDDEQAIAFDWNKRVNVVKGVANALFYMHHDCSPPIVHRDISSKNVLLDSEYVAHVSDFGTSKFLNPNSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILLGKHPGDVISSLLLSSSSTSVASTLDNMPLMDKLDQRLPHPTSTIVKEVVSVAKIAIACLTESPRSRPTMEQVAKELVN 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12471g00001 1191 FunFam MDIS1-interacting receptor like kinase 2 994 1191 - -
Mupr12471g00001 1191 Pfam Leucine Rich Repeat 693 715 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine Rich Repeat 309 330 IPR001611 GO:0005515
Mupr12471g00001 1191 PRINTS Leucine-rich repeat signature 742 755 - -
Mupr12471g00001 1191 PRINTS Leucine-rich repeat signature 763 776 - -
Mupr12471g00001 1191 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Mupr12471g00001 1191 SUPERFAMILY L domain-like 88 350 - -
Mupr12471g00001 1191 SUPERFAMILY L domain-like 262 637 - -
Mupr12471g00001 1191 FunFam Uncharacterized protein 548 843 - -
Mupr12471g00001 1191 Gene3D Ribonuclease Inhibitor 525 835 IPR032675 -
Mupr12471g00001 1191 Gene3D Ribonuclease Inhibitor 260 524 IPR032675 -
Mupr12471g00001 1191 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1039 1051 IPR008266 GO:0004672|GO:0006468
Mupr12471g00001 1191 SMART LRR_sd22_2 140 166 - -
Mupr12471g00001 1191 SMART LRR_sd22_2 355 370 - -
Mupr12471g00001 1191 SMART LRR_sd22_2 739 771 - -
Mupr12471g00001 1191 SMART LRR_sd22_2 475 501 - -
Mupr12471g00001 1191 SMART LRR_sd22_2 643 669 - -
Mupr12471g00001 1191 SMART LRR_sd22_2 379 405 - -
Mupr12471g00001 1191 Gene3D Ribonuclease Inhibitor 50 198 IPR032675 -
Mupr12471g00001 1191 Gene3D Phosphorylase Kinase; domain 1 875 993 - -
Mupr12471g00001 1191 FunFam Leucine-rich repeat receptor protein kinase MSP1 877 993 - -
Mupr12471g00001 1191 FunFam Leucine-rich repeat receptor protein kinase EMS1 206 301 - -
Mupr12471g00001 1191 ProSiteProfiles Protein kinase domain profile. 915 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12471g00001 1191 ProSiteProfiles Leucine-rich repeat profile. 357 380 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine rich repeat 333 392 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine rich repeat 453 512 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine rich repeat 742 799 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Leucine rich repeat 621 680 IPR001611 GO:0005515
Mupr12471g00001 1191 Pfam Protein kinase domain 916 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12471g00001 1191 FunFam Leucine-rich receptor-like protein kinase family protein 302 396 - -
Mupr12471g00001 1191 ProSiteProfiles Leucine-rich repeat profile. 765 787 IPR001611 GO:0005515
Mupr12471g00001 1191 Gene3D Ribonuclease Inhibitor 199 259 IPR032675 -
Mupr12471g00001 1191 SUPERFAMILY Protein kinase-like (PK-like) 894 1189 IPR011009 -
Mupr12471g00001 1191 FunFam MDIS1-interacting receptor like kinase 2 isoform A 50 205 - -
Mupr12471g00001 1191 SMART LRR_typ_2 475 499 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 644 667 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 236 260 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 355 378 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 212 235 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 164 188 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 691 714 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 451 474 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 140 163 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 619 642 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 403 427 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 379 402 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 307 331 IPR003591 -
Mupr12471g00001 1191 SMART LRR_typ_2 763 785 IPR003591 -
Mupr12471g00001 1191 ProSiteProfiles Leucine-rich repeat profile. 645 668 IPR001611 GO:0005515
Mupr12471g00001 1191 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 397 547 - -
Mupr12471g00001 1191 Gene3D Transferase(Phosphotransferase) domain 1 994 1191 - -
Mupr12471g00001 1191 SUPERFAMILY L domain-like 527 838 - -
Mupr12471g00001 1191 PANTHER LEUCINE RICH REPEAT KINASE 2 472 1190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12471g00001 Mupr-Chr12471 263 4120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12471g00001 42 637 Receptor kinase-like Gene Family AT4G08850 34.769 3.20e-95 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr12471g00001 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12471g00001 - - gmx:106794215 1670.98