Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12470g00003 ATGAATGGAAGGAACAGGTTCCCCTTCACCCCTTCCCAGTGGCAAGAGCTTGAACACCAAGCACTCATCTACAAATACATGGCTTCAGGCATCTCCATCCCCCCTGACCTTCTCTTCACCATCAAAAGGAACCACTTTGACTCCTCAAGGCTCTTGCCTCACCACCCTCAACACTTTGGATGGAACTACTTGCCAATGGGGTTGGGGAGAAAAATAGACCCTGAGCCAGGGAGGTGCAGGAGAACTGATGGGAAGAAGTGGAGGTGCTCCAAGGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACGACAGTTGTAACTACAAACACAGATGCCTCAGCCCCAACAATCTTATCAATCACCAAAAACACTCCTGCACTCTCCCCAACCACTCATGACACTTACCATCATCACCACCACCATCCTCAACACTCCTTCCTTTATCATCAGTCCAGGCCCTCAAACGCTGTCGCTTTGTCCTTTCAAGACAACAGTGCCCCCTTGTTTCTCGACACCCACAATAACAACACTGACTGCAGGAACGGGTATGTGTATGGACTGAAAGAGGAGGTGGATGAGCATGCGTTCTTCACGGAACCTTCTGGAACAATGAGAAGCTTCTCTACTTCGTCGATGGAAGATTCTTGGCAACTGACACCACTGACTATAAGCTCGTCTTCGTCTTCGAAAGAGAGGAACGAGAACAACGAGTATTCGTACTTGCAACTTCAGAGCCTGGGTAGCAACAAGGGTTGCTACGGTGATATAAAGTGCGAAACGTTGAGAAAACAACTTGGAAAAGAAGAACCTCAGAAAACCATTCATCGTTTCTTCGACGAGTGGCCACCGAAAAGCAGAGGATCGTGGCTGGATTTGGACGACAAGTCCTCCACCACACAGCTTTCGATTTCCATTCCAACGTCTTCTCATGATTTCACGACTTTCAGTTCAACAAGCCAACGAGGGTCATCAGTGGGTGGAGAATTATGGTTGATTTTAGCTTTCAATAGTGGGGTCCTTGTACTTGAACCAAAGGCCAATAATGTGGTGGGGTTCACATTGTGTTTTGTGAGGCCTCCCTTTAATTGCTCCCCCTTTTTTCCATCTGTTGTTCAAGTCCACCTGTGTTTCCATCCAGGGATCCAATGTGTGCTGTTTGCTTTCATTTTCTGTTTTTCTGGTTTGAGCTAA 1251 0.474 MNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRNHFDSSRLLPHHPQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTVVTTNTDASAPTILSITKNTPALSPTTHDTYHHHHHHPQHSFLYHQSRPSNAVALSFQDNSAPLFLDTHNNNTDCRNGYVYGLKEEVDEHAFFTEPSGTMRSFSTSSMEDSWQLTPLTISSSSSSKERNENNEYSYLQLQSLGSNKGCYGDIKCETLRKQLGKEEPQKTIHRFFDEWPPKSRGSWLDLDDKSSTTQLSISIPTSSHDFTTFSSTSQRGSSVGGELWLILAFNSGVLVLEPKANNVVGFTLCFVRPPFNCSPFFPSVVQVHLCFHPGIQCVLFAFIFCFSGLS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12470g00003 416 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr12470g00003 416 PANTHER GROWTH-REGULATING FACTOR 5 8 331 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mupr12470g00003 416 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr12470g00003 416 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr12470g00003 416 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
Mupr12470g00003 416 Pfam WRC 74 116 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12470g00003 Mupr-Chr12470 10053 11616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12470g00003 6 116 GRF Transcription Factor Family AT3G13960 69.912 9.58e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mupr12470g00003 WRC 9.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12470g00003 - - gmx:100783524 539.265