Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12467g00001 ATGTTCCTCGACAAACTTATCAGCAAAGCTTCCAACGCTTTGGATAAAATTCGATCTGAAAGCAGCCCAACAAACATGAGCGAGTTGGATATTAGACTGTTCCCTCACAAAGCTAACAAAACACTCTCCATTATTGACAATGGTATTGGCATGACCAGATATGGTAATGCATCGCACTTTGTTTTGTTTGATTTGTGCATGTGCATTGTATGTTTGGAAATTATAGTCATCAATTTGGTCAACAATTTGGGCACCAAGATGAAGGAGGGAGGTGCTGATATTGGTTTCCATTCCGCTTACTTGGTTGCTGACAAGGTTATCGTCACTACTAAGCACAACGACCATGACCAATACATATGGGAATCTCAAGCCAATGCCTCATTTATTGTTACCAAGGACCTTAATGGCCCACGACTTTCAAGGGGAACCAAAATCACCCTTTTTCTCAAGGATGACCAGTTAAAGTACTTGGAAGAGACCAAGATCAAGGATCTTGTCAAGAAACACTCTCAATTCATTAGCCACCCCATTTACCTTTGGACTGATAATGAGGATAAAGAGAAAGATTCTAATGAGATTTCTCACCAGTGGCAACTAATTAACAACCACAAATCGATTTCGTTACAAACTCCAGAATTGCAAGAAGAGATGGATAACAAACCTATGGGTGAAACAAGTGAAAACCTTAGGAACTACTTACCTAGCGATCTTGCATTCTCCATTTTGTCAAAATTGCCTTTAAAATCTCTCAAGAGATTTGGATGCGTACATAAGTCATGGGCTACATTATTTGAAAACCCTCATTTCATGAGGATCTTTCGCAACAATTTCATTTCTAATCATCATTCCTACTATGACGATACATCTGTTTTATTGCATCGGATTTTGATAAGTGATTACCCATGTCATAAAAGTTCCACCTTGTTTTCACTTTCCGGTGACAGGTTTCAAAATAGGGTCAAATTAGAGTGGCCAAATCCATTGCAAGAGGATGAGCCTATTTTTTATATTTTGGGTTCTTCTAGTATAAATGGAATTCTTTGTCTTTACAATTACACGCAAACAACAACTACATTGTGGAACCCAGCTACTGGGGAATTCAAAGTCATTCCTCCTAGCCTAAATGAGTCTGTACCATTTAATGTGTACCTTTCTTTTACCCTTTATGGATTTGGGTATGATTGTGTTAGGGATGACTACATGGTGATTAGGTTTCTATATTATTCTGAAGATGACAATAATGATTATTATTCGGATTTCCTTATGGACTTTTGCTTCCTAGATCACTTATGGGAGATATATAGCCTAAGAAGTAACTCATGGAAAAAACTTGATGTCAATTTGCCTTCTCTTCATAACGCACGTTTCAAAAGTTTGTACTTGGATGGAAAGTGTCATTGGTTGAGTTCAACGGTCGATGGTCAAAGAACAAATGAACTGTTCTTGGTGTCGTTTGACTTGAGCACTGAATTATTCTTTACAACATACATACCCTTGGATATACCCTTTGACATTGATGATATTTATTCTGTGGTGTACGATAGCGCCTTGGTGTTGTTAAATGGGTCCATTGCTATAGCTCCAAGATATGTAGATATGACTAGATTTTATATATTAGTTTTGGGTGAACTTGGTGCAAAGGAATCATGGACTAAACTCTCTATTGGTTGGCCCTTGCTTGATATTGGATTTTTTATAGGAATTGGAAAGAAAGGTGATATATTCTTTATAAAAATGAATAATGACATAATTTGTTTGGATTTAAGCACTGGTATGATTGAGGAGCTTGGTGTTCAATCAAATGATATAAGTCAAGTAGTATTTTATAAGGAAAGTCTTCTTTTGATTGGAGGAATAAATAAT 1863 0.3671 MFLDKLISKASNALDKIRSESSPTNMSELDIRLFPHKANKTLSIIDNGIGMTRYGNASHFVLFDLCMCIVCLEIIVINLVNNLGTKMKEGGADIGFHSAYLVADKVIVTTKHNDHDQYIWESQANASFIVTKDLNGPRLSRGTKITLFLKDDQLKYLEETKIKDLVKKHSQFISHPIYLWTDNEDKEKDSNEISHQWQLINNHKSISLQTPELQEEMDNKPMGETSENLRNYLPSDLAFSILSKLPLKSLKRFGCVHKSWATLFENPHFMRIFRNNFISNHHSYYDDTSVLLHRILISDYPCHKSSTLFSLSGDRFQNRVKLEWPNPLQEDEPIFYILGSSSINGILCLYNYTQTTTTLWNPATGEFKVIPPSLNESVPFNVYLSFTLYGFGYDCVRDDYMVIRFLYYSEDDNNDYYSDFLMDFCFLDHLWEIYSLRSNSWKKLDVNLPSLHNARFKSLYLDGKCHWLSSTVDGQRTNELFLVSFDLSTELFFTTYIPLDIPFDIDDIYSVVYDSALVLLNGSIAIAPRYVDMTRFYILVLGELGAKESWTKLSIGWPLLDIGFFIGIGKKGDIFFIKMNNDIICLDLSTGMIEELGVQSNDISQVVFYKESLLLIGGINN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12467g00001 621 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 2 213 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mupr12467g00001 621 SMART fbox_2 233 273 IPR001810 GO:0005515
Mupr12467g00001 621 SUPERFAMILY F-box domain 231 319 IPR036047 GO:0005515
Mupr12467g00001 621 NCBIfam F-box protein interaction domain 342 553 IPR017451 -
Mupr12467g00001 621 Gene3D - 1 191 IPR036890 -
Mupr12467g00001 621 Pfam Hsp90 protein 156 219 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mupr12467g00001 621 SUPERFAMILY Galactose oxidase, central domain 340 618 IPR011043 -
Mupr12467g00001 621 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 184 IPR036890 -
Mupr12467g00001 621 PRINTS 90kDa heat shock protein signature 141 158 IPR020575 -
Mupr12467g00001 621 PRINTS 90kDa heat shock protein signature 41 58 IPR020575 -
Mupr12467g00001 621 PRINTS 90kDa heat shock protein signature 159 177 IPR020575 -
Mupr12467g00001 621 PRINTS 90kDa heat shock protein signature 89 111 IPR020575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12467g00001 Mupr-Chr12467 2347 4376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12467g00001 428 587 Carbohydrate Esterase AT1G25141 27.160 3.62e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12467g00001 - - vun:114172490 421.009