Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12462g00001 CGTTACCAGAAGGAGCATTATTGCAGGGACAATTCAATGGGATCTGGCAATGAAGGATGGTCAAACCATGTTTTCCTGAGTTTCAGGGGTGAGGACACGCGCAGAGGTTTCACAGACCATCTTTTTGCTTCACTAGAGAGACGGGGGATCAAGACTTTCAGGGATGATCATGATCTCGAGAGGGGGAAAGTGATTTCAGTGGAACTCATTAAGGGCATTGAAGAGTCCATGTTTGCACTCATCATTCTCTCACCAAACTATGCTTCCTCAACTTGGTGTTTGGATGAGCTCCAAAAGATTGTGGAGTGCAAGAAAGAGGTTTTTCCAATCTTTTATGGTGTGACCCCCTCTGATGTGAGGCACCAAAGGGGAAGCTTTGCCATGGCTTTCAGAGAACATGAAGATAAATTCAGAGAAGATGGAAACAAGGTCAAAAGATGGAGACGTGCCTTGACAGAGGTTGCAACTTACTCTGGCTGGGACTCTAAGGATCAGCATGAGGCAGCACTGATTGAAACAATTGTTGAACATATACAGAAAAAAATAATTCCTAGGTTGCCATGTTGCACAGACAACCTTGTTGGGATTGATTCACGGATGAAGGAAGTGAATTCACTCATGGGCATATGGTTAAATGATGTTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGTAAGACAACACTTGCTAGATTAGTCTATGAAGAAATCAAAGAGAACTTCAAGGTTAGTTGCTTTCTTGAGAACATTAGAGAGGTGTCTAAGACAAATGGCTTAGTTCACATTCAAAAGGAACTTCTTTCTCATCTTAATGTAAGAAGCAGTGATTTTTATAATTCCCATGATGGGAAAAAGATAATAGCAAACTCTTTAAGGAACAAAAAGGTTTTTCTTGTTCTTGATGATGTAAGTGAGTTAAGCCAATTGGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCGGGAAGTAGAGTAATAATCACAACTAGAGATAACCACCTGCTAAAGACACATGGAGTGGATATAACTTATAAGGCTAGAGGCTTACCCCGAAATGAAGCCCTCCAACTCTTTTGTTTGAAAGCATTTAAGCGAGATCAACCTGAAGAAGAGTATTTGAACTTGTGCAAAGAAGTGGTTGAATATGCAAGAGGCCTTCCATTGGCACTTGAGGTATTGGGTTCCCATCTTCATGGAAGAACTGTTGAGGTTTGGCATAGTGCTTTAGAACAAATACGAAGTTTTCCTCACTCCAAAATCCAGGATACACTGAAAGTAAGTTATGACAGTTTACAACCTATGGAGAAAAAAATATTTCTAGATATTGCCTGTTTCTTCAAAGGGATGGACATAGGTGAAGTGATCAATATCCTAGAAAATTGTGGTGATCATCCCATAATTGGAATTGACATTTTGATTGAAAGATCTTTGGTAACTATAGATACGATGTATAAATTGGGGATGCATGATTTGCTACAAGAAATGGGTAGGAATATTGTATTTCAAGAGTCTCCAAGTGATCCCGGCAAACGTAGTAGATTGTGGTCTCAAAAGGACATTGATTATGTATTGACAAAAAACAAGGGAACTGATGAAATTCAAGGCATAGTTCTGAACTTAGTTCAACCGTATGATTATGAAGCACGCTGGAACAATGGAGCCTTCTCCAAGATAAGTCAGTTAAGGTTATTAATGTTGTGTGACATGCAGCTTCCCCTTGGCCTCAGTTGCCTTCCTAGTGCACTAAGAGTTCTTCATTGGAGAGGATGTCCTTTGAAAACCGTGCCACTTCCTAATCAACTAGATGAAGTTGTTGACCTCAAATTGCCTCATAGCAGAATAGAACAACTTTGGCATGGGACAAAGCTTCTGGAAAAATTGAAGTCCATCAATTTGAGCTTTTCCGAGAACCTAAAGCAGTCCCCGGACTTTGTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGCACAAGTTTGACTGAGGTTCATCCATCTCTTGTACACCATAAGAAACTTGTTAGGGTGGATTTAAAAGACTGCAAAAGGCTCAAAACTCTTCCAAGTAAAATGGAGATGAGTTCCTTGAAAGATTTAAATCTTTCTGGTTGCTCTGGATTTAAATATCTTCCAGAGTTTGGGGAAAGCATGGAACATTTGTCAGAGCTTTCTTTAGAGGGGACTGACATAAGAAAACTACCCTCATCACTTGGATGTCTAGTTGGCCTTGCTCTTTTGGATTTGGGGAATTGCAAGAATCTTGTTTGCCTTCCAGATACCATTCATAAATTAAAGTCCCTCAAAGTTCTGGATGTTTCTGGCTGCTCAAAACTTAGTAGCTTGCCAGAGGGTTTAAAGGAAATCAAGAGTTTGGAGGAACTTAATGCAAGTGAAACTGCTATTCAAGAGCTACCTTCTTCTGTCTTTTATCTGGAAAACCTCAAAGTTATCTCAGTTGCTGGGTGCAAGGGGCCAGTATCTAACACAGTAAATAGATTTTTTCTCCCCTTTAAGTGGCTGTTTGGGAATCAACAAACTCCTATTGGATTTAGATTGCCACCTTCTCTACCTAATCTACCCTCTTTAAAGATAATAAATTTAAGTTACTGCAATCTATCTGAAGAGTCACTCCCAGATTATTTTTGTCACTTATCTTCATTGGCGATTCTAGATCTCACTGGCAACAATTTTGTAAGCCTACCAAGTTGCATTTCCAAACTTACAAAGCTTCAACGTCTTATCCTAAACTACTGCGAAAAGCTTCAAAGGTTGCCAGAGCTTCAATCAAGCATGGTAGAATTGGATGCAAGCAATTGCACTTCATTGGAAACTTTCAAATTCAATCCATCTAAGCCATGCAGTCTCTTTGCATCACCCACAAAATGGCATTTACCGCATTTACCAAGAGAACTGAGAGAACTGAGAGGCTTTTTGAAGGACCAACTCAATCTTCCCAGAGCAAGGTTTGACATGCTTATCACAGGGAGTGAAATTCCATCATGGTTTGTCCCTCAAATATGTGTTTCGTGGGCAAAAATAGCAGTCCCTCCTAATTGCCCTCTAAATGAATGGGTGGGATTTGCTTTGTGTTTCCTGTTAGTAAGTTGCGCCTTCCCAGAGGAGTGCCATCACGAAGTTGAGTGCTATTTATTTGGACCTGATGGTAAGATGTTTATCAGCTCCAGAAATTTACCTCCCATGGAGCCAAATTACCCTCACCTTTATATTCTCTATTTATCCATTGATAAATACCGTGACATAATTTATGAAGGTGGTGACAGCGGTGAAATTGAATTTGTTTTGAAAAGCTACTGTTGCAATTCATTGAACATAGTAAGATGTGGGTGTCGTTTG 3360 0.4006 RYQKEHYCRDNSMGSGNEGWSNHVFLSFRGEDTRRGFTDHLFASLERRGIKTFRDDHDLERGKVISVELIKGIEESMFALIILSPNYASSTWCLDELQKIVECKKEVFPIFYGVTPSDVRHQRGSFAMAFREHEDKFREDGNKVKRWRRALTEVATYSGWDSKDQHEAALIETIVEHIQKKIIPRLPCCTDNLVGIDSRMKEVNSLMGIWLNDVRFIGIWGMGGIGKTTLARLVYEEIKENFKVSCFLENIREVSKTNGLVHIQKELLSHLNVRSSDFYNSHDGKKIIANSLRNKKVFLVLDDVSELSQLENLAGKQEWFGPGSRVIITTRDNHLLKTHGVDITYKARGLPRNEALQLFCLKAFKRDQPEEEYLNLCKEVVEYARGLPLALEVLGSHLHGRTVEVWHSALEQIRSFPHSKIQDTLKVSYDSLQPMEKKIFLDIACFFKGMDIGEVINILENCGDHPIIGIDILIERSLVTIDTMYKLGMHDLLQEMGRNIVFQESPSDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNLVQPYDYEARWNNGAFSKISQLRLLMLCDMQLPLGLSCLPSALRVLHWRGCPLKTVPLPNQLDEVVDLKLPHSRIEQLWHGTKLLEKLKSINLSFSENLKQSPDFVGVPNLESLVLEGCTSLTEVHPSLVHHKKLVRVDLKDCKRLKTLPSKMEMSSLKDLNLSGCSGFKYLPEFGESMEHLSELSLEGTDIRKLPSSLGCLVGLALLDLGNCKNLVCLPDTIHKLKSLKVLDVSGCSKLSSLPEGLKEIKSLEELNASETAIQELPSSVFYLENLKVISVAGCKGPVSNTVNRFFLPFKWLFGNQQTPIGFRLPPSLPNLPSLKIINLSYCNLSEESLPDYFCHLSSLAILDLTGNNFVSLPSCISKLTKLQRLILNYCEKLQRLPELQSSMVELDASNCTSLETFKFNPSKPCSLFASPTKWHLPHLPRELRELRGFLKDQLNLPRARFDMLITGSEIPSWFVPQICVSWAKIAVPPNCPLNEWVGFALCFLLVSCAFPEECHHEVECYLFGPDGKMFISSRNLPPMEPNYPHLYILYLSIDKYRDIIYEGGDSGEIEFVLKSYCCNSLNIVRCGCRL 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12462g00001 1120 PRINTS Disease resistance protein signature 291 305 - -
Mupr12462g00001 1120 PRINTS Disease resistance protein signature 216 231 - -
Mupr12462g00001 1120 PRINTS Disease resistance protein signature 384 398 - -
Mupr12462g00001 1120 PRINTS Disease resistance protein signature 764 780 - -
Mupr12462g00001 1120 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Mupr12462g00001 1120 Gene3D Ribonuclease Inhibitor 552 716 IPR032675 -
Mupr12462g00001 1120 Pfam NB-ARC domain 212 434 IPR002182 GO:0043531
Mupr12462g00001 1120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 715 IPR044974 GO:0006952
Mupr12462g00001 1120 SMART till_3 21 157 IPR000157 GO:0007165
Mupr12462g00001 1120 Gene3D - 182 344 IPR027417 -
Mupr12462g00001 1120 Pfam TIR domain 23 194 IPR000157 GO:0007165
Mupr12462g00001 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
Mupr12462g00001 1120 SUPERFAMILY RNI-like 648 946 - -
Mupr12462g00001 1120 FunFam Disease resistance protein (TIR-NBS-LRR class) 351 433 - -
Mupr12462g00001 1120 Gene3D - 348 433 IPR042197 -
Mupr12462g00001 1120 Gene3D - 16 181 IPR035897 -
Mupr12462g00001 1120 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Mupr12462g00001 1120 Gene3D Ribonuclease Inhibitor 841 990 IPR032675 -
Mupr12462g00001 1120 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 183 - -
Mupr12462g00001 1120 ProSiteProfiles TIR domain profile. 20 182 IPR000157 GO:0007165
Mupr12462g00001 1120 SMART LRR_typ_2 790 813 IPR003591 -
Mupr12462g00001 1120 SMART LRR_typ_2 719 742 IPR003591 -
Mupr12462g00001 1120 SMART LRR_typ_2 886 909 IPR003591 -
Mupr12462g00001 1120 SMART LRR_typ_2 861 885 IPR003591 -
Mupr12462g00001 1120 SMART LRR_typ_2 766 789 IPR003591 -
Mupr12462g00001 1120 Gene3D Ribonuclease Inhibitor 717 833 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12462g00001 Mupr-Chr12462 8186 12654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12462g00001 29 816 WRKY Transcription Factor Family AT4G12020 33.251 3.59e-112 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12462g00001 - - gmx:100815486 1800.79