Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12455g00010 ATGCTGTTGCGTCTTCTTTCTCCCCTTTCACTCGTGCACCTTGCCACTGATGTTCTCCTCAAACCCGTTTTCCTTCATGGCTTATCCGGTTCCCTCCACCTTCTATTGCTCGTTGCGGTTTCGCTGTCATGGCTCTGGAAGAATTTCACAGCACGAGCCAGGGATGAGTCTAATGAGAAACCCAATAACAAGCTCTTCAAAACGACCGTGTTTTGTTCTCTCGGTTTTTCTGCGTTCAGTTTCGCCCTCTTTTTGTTTAGCTACTTCTACTGGTACACGAGTGGCTGGACAGAAGAAAAGCTCGTGACCCTTTTGGACTCGGCAATCAAAACGCTTGCATGGGGCGTCGTTTGTGTTTGCTTGCACAAGGGTTTCTTGTTCTTCAGTTTTGGCGAAAGAACGTTCTCGTGCTTCTTCAAAGCTTGGTGCGCCTTCTACCTCTTTGTCTCTTGCTATTGCTTCGTGGTCGACATTGCTGTACTCTCCGAGAGACGCGGGGCATTGCCAACTCAGTACTTGGTTTCCGATGTTGTATCCACTTGTGCTGCTTTGTTCTTCTGTTACGCTGGGTATTTTGTGAAAAAGGAGGGTAACCTTAACGGTATTCAGGAACCTCTTTTGAACGGTGATGCCTTGGGGTCAAAAGAGACCAAGGGTTGTGACAACGTTACCCCTTTCTCATATGCTGGAGTTTTGAGCATTCTCACTTTCTCTTGGGTGGGTCCTCTTGTGGCTGTTGGCAACAAGAAGCCCTTGGACCTTGAGGATGTTCCTCAACTAGACAGCAAAGATAGTGTGGTTGGTGCTTTTCCAAGTTTCAGAGATAAATTCGAGGCTGATTGTGGTGGAATTACTAGTTTGACCACACTGAAGTTGGTGAAGTCGTTGGTAATGTTAACGTGGAAGGACATTGTTTTCACTGCTATTCTGGCGTTGTTAAATACTTTGGCTTCTTATGTTGGTCCCTATCTCATTGATTCTTTTGTTCAGTACCTTGACGGACAACGGCAGTACGAAAACCAGGGCTATGTTTTGGTTTCTGCGTTTTTCTTTGCCAAGCTTGTAGAGTGCCTGTCCCAAAGGCACTGGTCGTTTAGGTTGCAGCAAGTTGGAATTCGAATTCGGGCGCTGCTTGTCACCATGATCTACAACAAGGCTCTCACCCTTTCTTGTCAGTCAAGGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGCAACTTCAGTTGGTACATGCACGATTTGTGGATGGTGGCTCTGCAGGTTGTGTTGGCCTTGTTGATTTTATATAAGAACCTTGGCCTTGCTTCGGTTGCCACCCTTGTTGCAACCATTGTTGTTATGTTGGCAAATATTCCCTTAGGATCATTGCAAGAGAAGTTTCAGAATAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCCACGTCTGAGGTTTTGAGGAACATGAGGATCCTTAAACTACAAGGATGGGAAATGAAGTTTCTATCAAAAATAACTGAGTTCAGAAAAACTGAGCAAGGCTGGTTGAAAAAGTATGTTTATACAGCAGCCATGACCACTTTTGTGTTCTGGGGTGCCCCTACATTTGTATCTGTGGTTACTTTTGGTACATGTATGCTTATTGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCCATTTATAATCTTCCTGATACGATTGCAATGATTGCGCAGACTAAAGTTTCTCTTGATAGGATTGCATCATTCCTTCGGCTTGAAGACTTGCGGTCTGATGTTGTAGAGAAGCTTCCTCCGGGCAGTTCGGACACAGCAATTGAAGTAATTGATGGACACTTTTCTTGGGATTTATCTTCCCCTAACCCAACATTGCAGAATATAAATCTCAAAGTTTTTCATGGGATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAAGTTTGTGGAACAAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGCGGCAAGATAGAGGATAATATTTTGTTTGGTGAACACATGAATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGTTCCCTGAAGAAGGATCTGGAGATATTGTCATTTGGTGATCAGACAATTATAGGAGAACGGGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCACGTGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATGCTGATCTGCTTAATAGTGGTACTGACTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCCTTGGATGGAGTGACAACATCTAATGAAATAAGTACCTCTGGCACGCATGGTTTTAAAGAAGAGGCAAGCAAAGATGAGCAAAATGGTAAAACAGACAACAAAAGTGAACCAAAAGGCCAGCTTGTTCAAGATGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAACTATATCAGAACGGCATATGGAGGAGCCCTGGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCGACTCCCATCTCAACAGATGTGGAGCCACCTGTTGGAGGAACGACTCTTATAGCAGTCTATGTTGGTCTATCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCATTGCTTCTTGTCACAGCTGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTCTGCATTTTTCGTGCTCCAATGTCATTTTTTGATTCCACTCCAAGTGGGCGAGTCCTTAACAGAGCTTCAACTGACCAAAGTGCAGTGGATACAGACATTCCTTCTCAAATTGCATCAGTTGCCTTCAGTGCGATCCAGCTTGTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTATCTTTATACCTGTGATAGCAATCAGCATCTGGTATCAGCAATATTATCTACCATCAGCTCGAGAACTGTCACGTTTAGTTGGAGTCTGCAAAGCCCCAACCATTCAACACTTTGCTGAATCAATTTCTGGTACTTCAACAATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACATATATGAAACTGACTGATGGATATTCTCGGCCAATATTCAATGTGTCTGCTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTGCTATCACATTTGCCTTTTCCTTAATATTCTTAATATCTATTCCACAGGGATTCATAGATCCAGGCATTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAATATGATACAAACTTGGGTGATATGGAATCTCTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATAGTTGTATTCCTAGTGAGCCTCCCCTTGTCGTAGAAGAAAATCGGCCAGATCCTTCTTGGCCTTCACATGGCGAAGTTGTTATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCACTTGTATTGCGTGGCCTTACATGCAAATTTCATGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAGCACTTTTCCGAATTGTTGAGCCTGCTGCTGGGCAAGTTATGATTGACAGCATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCCTCAGTTAGTGAGAACGGTGAGAATTGGAGTATGGGTCAAAGGCAGTTGGTCTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTCCTTGATGAAGCCACTGCATCAGTGGATACCGCAACGGATAATTTGATTCAGCAAACTCTTAAGCAACATTTCTCTGATTCTACGGTCATTATCATTGCACATCGAATAACTTCTGTTGTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTACGACACCCCAACAACTTTGCTAGAGAACAAGTCATCATCATTTGCTCAACTTGTTGCAGAGTATACTACGAGGTCCAACTCCAGTTTTCAGAAATCTGCTGATCACTGA 4476 0.4269 MLLRLLSPLSLVHLATDVLLKPVFLHGLSGSLHLLLLVAVSLSWLWKNFTARARDESNEKPNNKLFKTTVFCSLGFSAFSFALFLFSYFYWYTSGWTEEKLVTLLDSAIKTLAWGVVCVCLHKGFLFFSFGERTFSCFFKAWCAFYLFVSCYCFVVDIAVLSERRGALPTQYLVSDVVSTCAALFFCYAGYFVKKEGNLNGIQEPLLNGDALGSKETKGCDNVTPFSYAGVLSILTFSWVGPLVAVGNKKPLDLEDVPQLDSKDSVVGAFPSFRDKFEADCGGITSLTTLKLVKSLVMLTWKDIVFTAILALLNTLASYVGPYLIDSFVQYLDGQRQYENQGYVLVSAFFFAKLVECLSQRHWSFRLQQVGIRIRALLVTMIYNKALTLSCQSRQGHTSGEIINFMTVDAERVGNFSWYMHDLWMVALQVVLALLILYKNLGLASVATLVATIVVMLANIPLGSLQEKFQNKLMESKDTRMKATSEVLRNMRILKLQGWEMKFLSKITEFRKTEQGWLKKYVYTAAMTTFVFWGAPTFVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYNLPDTIAMIAQTKVSLDRIASFLRLEDLRSDVVEKLPPGSSDTAIEVIDGHFSWDLSSPNPTLQNINLKVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGEHMNRERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNSGTDFMELVGAHKKALSTLDSLDGVTTSNEISTSGTHGFKEEASKDEQNGKTDNKSEPKGQLVQDEEREKGKVGFSVYWNYIRTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISTDVEPPVGGTTLIAVYVGLSIGSSFCILARALLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRVLNRASTDQSAVDTDIPSQIASVAFSAIQLVGIIAVMSQVAWQVFIIFIPVIAISIWYQQYYLPSARELSRLVGVCKAPTIQHFAESISGTSTIRSFDQQSRFQETYMKLTDGYSRPIFNVSAAMEWLCFRLDMLSAITFAFSLIFLISIPQGFIDPGIAGLAVTYGLNLNMIQTWVIWNLCNLENKIISVERILQYSCIPSEPPLVVEENRPDPSWPSHGEVVIQDLQVRYAPHLPLVLRGLTCKFHGGLKTGIVGRTGSGKSTLIQALFRIVEPAAGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLKQHFSDSTVIIIAHRITSVVDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVAEYTTRSNSSFQKSADH 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12455g00010 1491 FunFam ABC transporter C family member 5 604 851 - -
Mupr12455g00010 1491 Pfam ABC transporter 637 771 IPR003439 GO:0005524
Mupr12455g00010 1491 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524|GO:0016887
Mupr12455g00010 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1471 IPR027417 -
Mupr12455g00010 1491 CDD ABC_6TM_ABCC_D2 922 1216 IPR044726 GO:0140359
Mupr12455g00010 1491 FunFam ABC transporter C family member 5 885 1222 - -
Mupr12455g00010 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 924 1204 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12455g00010 1491 Pfam ABC transporter 1259 1406 IPR003439 GO:0005524
Mupr12455g00010 1491 CDD ABCC_MRP_domain2 1239 1459 - -
Mupr12455g00010 1491 Gene3D - 602 854 IPR027417 -
Mupr12455g00010 1491 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 227 1478 - -
Mupr12455g00010 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 842 IPR003439 GO:0005524
Mupr12455g00010 1491 FunFam ABC transporter C family member 3 1224 1476 - -
Mupr12455g00010 1491 SMART AAA_5 1267 1460 IPR003593 GO:0016887
Mupr12455g00010 1491 SMART AAA_5 646 819 IPR003593 GO:0016887
Mupr12455g00010 1491 Gene3D - 1224 1477 IPR027417 -
Mupr12455g00010 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1475 IPR003439 GO:0005524
Mupr12455g00010 1491 SUPERFAMILY ABC transporter transmembrane region 921 1223 IPR036640 GO:0005524|GO:0016020
Mupr12455g00010 1491 SUPERFAMILY ABC transporter transmembrane region 297 601 IPR036640 GO:0005524|GO:0016020
Mupr12455g00010 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12455g00010 1491 MobiDBLite consensus disorder prediction 860 898 - -
Mupr12455g00010 1491 FunFam ABC transporter C family member 10 288 601 - -
Mupr12455g00010 1491 CDD ABCC_MRP_domain1 619 819 - -
Mupr12455g00010 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 841 IPR027417 -
Mupr12455g00010 1491 MobiDBLite consensus disorder prediction 870 898 - -
Mupr12455g00010 1491 Gene3D ABC transporter type 1, transmembrane domain 884 1222 IPR036640 GO:0005524|GO:0016020
Mupr12455g00010 1491 Gene3D ABC transporter type 1, transmembrane domain 285 601 IPR036640 GO:0005524|GO:0016020
Mupr12455g00010 1491 Pfam ABC transporter transmembrane region 306 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12455g00010 1491 Pfam ABC transporter transmembrane region 924 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12455g00010 1491 CDD ABC_6TM_ABCC_D1 306 593 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12455g00010 Mupr-Chr12455 14955 20549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12455g00010 619 849 Calmodulin-binding Proteins AT2G36910 29.921 8.19e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12455g00010 - K05666 gmx:100777836 2526.12