Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12454g00001 ATGTCGTTTGTCTTGTTATCACTCCATTCTCTTAGACACTTTGGCAGTAGTTTTCTGACATTTTTGGTGAAGCCGGTTTTCACGCATGGCTTATCTAGTTTCCTTCATCTGCTGTTGTTAGTGGTGCTTTTAGTGTCACTGGTGTGGAAGAAAGACATAGTTGGAGAAGGTTCCATAGAGAACATTAATAACACCTTGTTTGCAAGGACTAGGCTTTGTTCTCTGGGTGTTTCTGCTTTCAATTTTGCACTCTTTTTGTTTGAGTACTTTTCTTGGTACAATTTAAATGGTTGGTCAGAAGAAAAGCTTGTGATCCTTTTGGATTTGGTGCTCAAAACGGTTGCTTGGGGTGTTGGTGGCGTTTGCTTGTACAAGGAAAGAAGATTGTCAATCTTCTTCAGAGCTTGGTGCGTTCTCTACCTCTTTGTTTCCGGTTTTTGCTTTATAGTGGACATTGTTCTCTATGAAAATCATGCTGTTGTGCCTATTCAGTGCCTAGTTTCTGATGTTTTCTCTGTTTGTGTGGGTTTGTTCTTCTGTTACTTGGGGCTTTTTGTAAAAAACGAGAGTGAAGTAGGAGATAGACAAGATAGTACTCTTCAAGAATCTCTATTGGATGGTGATTCAAAAGATAGTGATGTGTTTGGGACAAAAGAGACCAAGGGGGGTGACACTGTTACCCCTTACTCTAATGCTGGAATTTTTAGCCTTCTTACCTTCTCTTGGGTTGGTCCTCTGATTGCTGTTGGCAAGAACAAGACTTTGGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAGTTGGAGCTTTTCCAACTTTTAGGGATAAGCTTGAGGCACATTGTGGAGAAAGTAACACAGTGACTACACTTCAGTTAGTGAAGTCATTAGTATTCTCAACCTGGAGAGAGATTATTTTCACAGCTATCCTTGCATTGGTAAACACATTGGCTTCTTTTGTTGGTCCCTATCTCATTGATGGTTTTGTTCAATACCTTAATGGAAAACAACAATTTGAAAACGAGGGCCTTGTTTTGGTGTCTGCATTTTTTGTGGCAAAGCTTGTGGAGTGCCTGACTCGTAGGCAATGGTTCTTTAGGTTGCAGCAGGTTGGAATACGAATGCGAGCACTGCTTGTGACAATCATATATAACAAAGCTTTGAACCTTTCATGTTACTCCAAGCAAGGCCACACTAGTGGGGAAATAATCAACTTCATGAGTGTTGATGCAGAAAGAGTTGGTGAGTTCAGTTGGCACCTACATGATCTGTGGTTAGTAGTTCTACAGGTTTTAGTAGCCTTGTTGATTTTGTATAGAAATCTTGGGCTTGCTTCAATTGCTGGCTTTGTTGCAATTCTCATTGTAATGTGGGTCAACATTCCCTTGGGATCAACCCAAGAGAAGTTTCACGACAAGTTGATGGAGTCAAAAGATTCAAGAATGAAAGCAACATCTGAGATTTTAAGGAACATGAGGATTCTCAAACTGCAAGGATGGGAAATGAAGTTTTTGTCTAAGATAACCGAACTCAGAAAGATTGAGCAAGGCTGGTTAAAAAAAGTTATACACACTTTGGCCATGATCATATTTGTATTTTGGTGTGCCCCAGCATTTGTGTCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTACACTTGCAATATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGACAATTTCAATGATGGCACAAACTAAGGTTTCTCTTGACAGGATTGCATCTTTCCTTCGTCTCAATGAGATGCAATCTGATGTTGTGGAGAAGCTTCAGCCTGGTAGTTCTAATATAGCAGTTGAAGTAGTTGATGGAAATTTCTCTTGGGATTCATTTTCCCCTAATACAACATTGCAAAACATAAATCTTAGAGTTTTTCATGGCATGAGGGTTGCTGTTTGTGGTACTGTTGGATCGGGAAAGTCTTCCTTACTTTCTTGTATATTAGGAGAAGTACCAAAGAAATCAGGGATCCTGAAGGTGTGTGGAACAAAGGCATATGTAGCTCAGTCACCATGGATACAAAGTAGCAAGATAGAGGATAATATACTGTTTGGCAAAGATATGGAAAGGGAAAGGTATGAGAAGGTCCTTCAAGCTTGTTGCCTAAAGAAGGATCTAGATGTTTTGCCATTTGGAGATCAGACTATTATAGGAGAGAGGGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTGTACCAAGATGCTGATATATATCTATTTGATGATGTGTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTTTTTAAGGAATGCTTACTGGGGCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCCACTGCTGACCTTATCTTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAATATAATGATCTGCTCAACTCAGGCACTGATTTTATGGAACTTGTTGGTGCTCATAAAGAAGCTTTGTCTGCACTTGATTCAATAGATATAAGGAGAGCATCTGATAAAACAAGTACATCACAAGAGGATGTGAGTGTCTCTCTTTCTCATGGTGTTGAAGAAAAAGAAGGGGAAAATGGTGGAAAAGATGACAAATGTGATCCAAAGGGCCAACTTGTTCAAGAAGAAGAAAGGGAGAAAGGTCAAGTTGGGTTTTTAGTCTACTGGAAATATATCACAGCAGCATACGGAGGAGCACTTATACCACTCATATTGTTGGCTGAAATTTTGTTTCAATTTCTTCAAATTGGAAGCAACTATTGGATAGCTTGGGCAACTCCTATCTCAACACATGTTGAGCCACCTGTTGGAGGAAGTACACTTATAGTTGTCTATGTAGCTTTGGCCATAGGAAGTTCTGTCTGTGTCTTTGCTAGAGCAACACTTGTTGCCATAGCTGGTTATAACACAGCTACTTTATTCTTCAACAACATGCATTTATGCATTTTCCGTGCTCCGATGTCATTTTTTGATGCCACTCCAAGTGGGAGAATCCTTAATAGAGCTTCTACTGATCAAAGTGCAGTGGATATAGACATTCCTTTACAAATTGGAACGTTTGCTTCGTGTGTGATCCATCTTGTTGGAATTATAGTGGTGATGTCTCAAGTTGCATGGCAGGTTTTCGTTGTCTTTATTCCTATTACTGCAATCAGCATCTGGTATCAGCAATATTATTTATCATCAGCCCGGGAACTTTCGCGTTTAGTTGGAGTATGCAAAGCTCCTGTCATTCAGCACTTTGCTGAAACAATATCAGGCGCATCAACCATCAAGAGCTTTAATCAAGTGTCAAGATTTCAGCTAACAAATATGAAACTGATGGATGGATATTCTCGCCCCAAGTTCAACATTGCTGGTGCCATGGAATGGTTGTGCTTCCGATTAGATATGTTGTCTTCTATCACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCACAGGGGTTCATAAATTCAGGTGTTGCTGGTTTAGCTGTAACTTATGGCCTTAATCTGAACATTATACAATCATGGATGATATGGGATCTTTGCAATTTGGAGACCAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCTCTTGTTGTAGAGGAAAACCAGCCACATGATTCTTGGCCATCATATGGCAGGATTGATATTCACAACTTGCAGGTACGTTATGCTCCACACATGCCATTTGTGTTGCATGGCCTTACATGCACATTTCATGGAGGACTGAAAATTGGAATTGTTGGGAGAACAGGAAGTGGCAAATCAACTCTCATACAAACACTTTTTAGAATCGTTGAGCCTACTGTTGGGAGAATAATGATTGATGACATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGATTGAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGCACTGTGAGAAGTAATCTGGACCCACTTGAAGAGTACACGGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGCTAGACTCTGCAGTTTGTGAGAATGGAGAGAATTGGAGTATGGGCCAAAGGCAATTGGTCTGTCTTGGTAGGGTGCTGCTTAAGAAGAGTAAGGTCTTGGTGCTAGATGAAGCTACTGCATCTGTTGACACAGCTACAGATAATTTGATTCGACAAACTCTTAGGCAACATTTCTCTGATTGCACAGTCATTACCATTGCACATAGAATAACTTCTGTCATTGATAGTGATATGGTTCTACTACTTAACCAAGGACTTATTGAGGAGTACGATTCCCCAACCAGGTTGCTAGAGGACAAGTTATCTTCTTTTGCTCAGCTTGTTGCAGAGTATACCACAAGGTCCAATTCCAGTTTTTGA 4479 0.4001 MSFVLLSLHSLRHFGSSFLTFLVKPVFTHGLSSFLHLLLLVVLLVSLVWKKDIVGEGSIENINNTLFARTRLCSLGVSAFNFALFLFEYFSWYNLNGWSEEKLVILLDLVLKTVAWGVGGVCLYKERRLSIFFRAWCVLYLFVSGFCFIVDIVLYENHAVVPIQCLVSDVFSVCVGLFFCYLGLFVKNESEVGDRQDSTLQESLLDGDSKDSDVFGTKETKGGDTVTPYSNAGIFSLLTFSWVGPLIAVGKNKTLDLEDVPQLDKRDSLVGAFPTFRDKLEAHCGESNTVTTLQLVKSLVFSTWREIIFTAILALVNTLASFVGPYLIDGFVQYLNGKQQFENEGLVLVSAFFVAKLVECLTRRQWFFRLQQVGIRMRALLVTIIYNKALNLSCYSKQGHTSGEIINFMSVDAERVGEFSWHLHDLWLVVLQVLVALLILYRNLGLASIAGFVAILIVMWVNIPLGSTQEKFHDKLMESKDSRMKATSEILRNMRILKLQGWEMKFLSKITELRKIEQGWLKKVIHTLAMIIFVFWCAPAFVSVVTFGTCMLIGIPLESGKILSTLAIFQILQEPIYNLPETISMMAQTKVSLDRIASFLRLNEMQSDVVEKLQPGSSNIAVEVVDGNFSWDSFSPNTTLQNINLRVFHGMRVAVCGTVGSGKSSLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSSKIEDNILFGKDMERERYEKVLQACCLKKDLDVLPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDVFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPTADLILVMKDGKITQCGKYNDLLNSGTDFMELVGAHKEALSALDSIDIRRASDKTSTSQEDVSVSLSHGVEEKEGENGGKDDKCDPKGQLVQEEEREKGQVGFLVYWKYITAAYGGALIPLILLAEILFQFLQIGSNYWIAWATPISTHVEPPVGGSTLIVVYVALAIGSSVCVFARATLVAIAGYNTATLFFNNMHLCIFRAPMSFFDATPSGRILNRASTDQSAVDIDIPLQIGTFASCVIHLVGIIVVMSQVAWQVFVVFIPITAISIWYQQYYLSSARELSRLVGVCKAPVIQHFAETISGASTIKSFNQVSRFQLTNMKLMDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFCLIFLISIPQGFINSGVAGLAVTYGLNLNIIQSWMIWDLCNLETKIISVERILQYTSIPSEPPLVVEENQPHDSWPSYGRIDIHNLQVRYAPHMPFVLHGLTCTFHGGLKIGIVGRTGSGKSTLIQTLFRIVEPTVGRIMIDDINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRRKEGKLDSAVCENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIRQTLRQHFSDCTVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFAQLVAEYTTRSNSSF 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12454g00001 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1250 1482 IPR003439 GO:0005524
Mupr12454g00001 1492 Gene3D ABC transporter type 1, transmembrane domain 280 605 IPR036640 GO:0005524|GO:0016020
Mupr12454g00001 1492 Gene3D ABC transporter type 1, transmembrane domain 892 1229 IPR036640 GO:0005524|GO:0016020
Mupr12454g00001 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 844 IPR027417 -
Mupr12454g00001 1492 Pfam ABC transporter 640 773 IPR003439 GO:0005524
Mupr12454g00001 1492 CDD ABCC_MRP_domain2 1246 1466 - -
Mupr12454g00001 1492 Pfam ABC transporter transmembrane region 308 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12454g00001 1492 Pfam ABC transporter transmembrane region 931 1174 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12454g00001 1492 Gene3D - 1231 1484 IPR027417 -
Mupr12454g00001 1492 FunFam ABC transporter C family member 3 1231 1483 - -
Mupr12454g00001 1492 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524|GO:0016887
Mupr12454g00001 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1483 - -
Mupr12454g00001 1492 SUPERFAMILY ABC transporter transmembrane region 928 1230 IPR036640 GO:0005524|GO:0016020
Mupr12454g00001 1492 SUPERFAMILY ABC transporter transmembrane region 299 600 IPR036640 GO:0005524|GO:0016020
Mupr12454g00001 1492 CDD ABC_6TM_ABCC_D2 929 1223 IPR044726 GO:0140359
Mupr12454g00001 1492 CDD ABCC_MRP_domain1 622 822 - -
Mupr12454g00001 1492 CDD ABC_6TM_ABCC_D1 309 596 IPR044746 GO:0140359
Mupr12454g00001 1492 SMART AAA_5 649 822 IPR003593 GO:0016887
Mupr12454g00001 1492 SMART AAA_5 1274 1459 IPR003593 GO:0016887
Mupr12454g00001 1492 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Mupr12454g00001 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12454g00001 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1472 IPR027417 -
Mupr12454g00001 1492 FunFam ABC transporter C family member 5 607 854 - -
Mupr12454g00001 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 845 IPR003439 GO:0005524
Mupr12454g00001 1492 FunFam ABC transporter C family member 5 892 1229 - -
Mupr12454g00001 1492 MobiDBLite consensus disorder prediction 876 903 - -
Mupr12454g00001 1492 MobiDBLite consensus disorder prediction 864 903 - -
Mupr12454g00001 1492 Gene3D - 628 871 IPR027417 -
Mupr12454g00001 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 588 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12454g00001 1492 FunFam ABC transporter C family member 10 291 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12454g00001 Mupr-Chr12454 1663 7726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12454g00001 622 879 Calmodulin-binding Proteins AT2G36910 29.856 2.16e-27 119