Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12451g00001 ATGGGTCGTTCTCGTGGGAATTTTCACCACGCCGATGAGGACCCCAACCAGAGGTCAAGGAGGAAAAAGAATCCTGCCAGCGGAGATAATTCAGAATCTGGAGCTGCAGGAAGCAAGAAGAAAGGTAGTGATTCGTTGGAGCTCTATCTGTTCGGCCAAGGAGCAGGTGAAGGGAAAAAGGCTCTGTACCACTGCAATTATTGTAATAAAGATATAACGGGAAAAATCCATATTAAGTGTGCCATGTGCCCAGATTTTGACTTGTGTATAGAGTGTTTTTCTGTTGGAGCTGAGGTGACACCTCATAAATGCAACCACCCTTACAGGGTTATGGATAATTTGTCTTTCCCTCTTATTTGCCCAGACTGGAATGCAGATGATGAAATTTTGCTTCTAGAGGGAATTGAAATGTATGGCTTGGGAAACTGGGCAGAAGTTGCGGAGCATGTTGGTACCAAAAACAAAGAATCATGCATAGAACACTATAAGAATGTATACTTGAACTCTCCATTCTTTCCTGTTCCGGATATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGAAGACAAGAAAGAGTTGAAGATTCCCATAAAGCTGGCTCCGCTAACCGTTTGCCTTCCAGTTTGA 654 0.4373 MGRSRGNFHHADEDPNQRSRRKKNPASGDNSESGAAGSKKKGSDSLELYLFGQGAGEGKKALYHCNYCNKDITGKIHIKCAMCPDFDLCIECFSVGAEVTPHKCNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEVAEHVGTKNKESCIEHYKNVYLNSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKELKIPIKLAPLTVCLPV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12451g00001 217 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 63 203 - -
Mupr12451g00001 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 170 IPR017930 -
Mupr12451g00001 217 MobiDBLite consensus disorder prediction 1 27 - -
Mupr12451g00001 217 ProSiteProfiles Myb-like domain profile. 123 166 IPR001005 -
Mupr12451g00001 217 ProSiteProfiles SANT domain profile. 118 170 IPR017884 -
Mupr12451g00001 217 ProSiteProfiles Zinc finger ZZ-type profile. 60 116 IPR000433 GO:0008270
Mupr12451g00001 217 SMART zz_5 59 104 IPR000433 GO:0008270
Mupr12451g00001 217 Pfam Zinc finger, ZZ type 61 101 IPR000433 GO:0008270
Mupr12451g00001 217 MobiDBLite consensus disorder prediction 1 41 - -
Mupr12451g00001 217 SUPERFAMILY Homeodomain-like 115 169 IPR009057 -
Mupr12451g00001 217 SUPERFAMILY RING/U-box 63 126 - -
Mupr12451g00001 217 ProSitePatterns Zinc finger ZZ-type signature. 65 92 IPR000433 GO:0008270
Mupr12451g00001 217 FunFam Transcriptional adapter 2 116 168 - -
Mupr12451g00001 217 FunFam Transcriptional adapter 56 111 - -
Mupr12451g00001 217 Gene3D - 56 111 IPR043145 -
Mupr12451g00001 217 Pfam Myb-like DNA-binding domain 122 165 IPR001005 -
Mupr12451g00001 217 CDD SANT 123 165 IPR001005 -
Mupr12451g00001 217 Gene3D - 117 168 - -
Mupr12451g00001 217 CDD ZZ_ADA2 63 111 IPR041983 -
Mupr12451g00001 217 SMART sant 119 168 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12451g00001 Mupr-Chr12451 4240 6909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12451g00001 1 210 EF-hand Containing Proteins AT3G07740 48.624 2.09e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12451g00001 Myb_DNA-binding 1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12451g00001 K11314 - gmx:100815514 377.481