Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12443g00007 ATGGGTTGTATTGAAAGTCATTTCATTATGGAGCATGTGATTGGTGGGAAGTTTAAACTAGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAGGCACCCACAGCTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATCGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTACTGTAACCGGAAGTTCACATTGAAGACTGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTCTCATGGGTCTAGGACGAAAAGCAAATCAAGTGTACGCCATTGACTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATTCTTCCCTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAGTATGATAAAATCAGTGAGACAAAGGTGTCAACTCCCATAGAGGTTCTCTGCAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGATCATTGCGGTTTGAGGACAAGCCAGATTATTCGTACTTAAAGAGACTTTTCCGAGACCTATTTATTCGAGAAGGCTATCAGTTTGACTACATTTTTGACTGGACTATGTTGAAATATCCACAGATTGGTGCCAGCTCTAGAGGGCGGGTCATTGGGAAAGAAATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGGAGGAACCCTGCTGCAAGTCCAGGTCCACGTGATCACAACAAACATAGGAGTTATGAGGATGTACCAGCACAAAAGGATTTGCACTATGTGCAACACAATACGGGTCGATATGGCAGCACTTCAAGAAGAGCCATGATCACATCAAACAAGCCAATTTCCTCAGGTGACCATACTGGCAGGCCAACCTTAAGTGGGGGCCGTCCATCCGGTGCTCATAGAATTCAACCTGTGTATGACACCAAACAAGCAACTTATACACGCAATGGCTCGATAAGAGGCAACCGCGATGATCATCTGCGGAGCTTTGAGCACCTGAATATCAGG 1305 0.4391 MGCIESHFIMEHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLILPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQIGASSRGRVIGKEIREKFSGAVEAFSRRNPAASPGPRDHNKHRSYEDVPAQKDLHYVQHNTGRYGSTSRRAMITSNKPISSGDHTGRPTLSGGRPSGAHRIQPVYDTKQATYTRNGSIRGNRDDHLRSFEHLNIR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12443g00007 435 SMART serkin_6 18 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12443g00007 435 Pfam Protein kinase domain 19 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12443g00007 435 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mupr12443g00007 435 FunFam Casein kinase 1-like protein 10 331 - -
Mupr12443g00007 435 MobiDBLite consensus disorder prediction 372 387 - -
Mupr12443g00007 435 PANTHER CASEIN KINASE-RELATED 16 343 - -
Mupr12443g00007 435 MobiDBLite consensus disorder prediction 372 400 - -
Mupr12443g00007 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Mupr12443g00007 435 FunFam Putative Casein kinase I 10 94 - -
Mupr12443g00007 435 ProSiteProfiles Protein kinase domain profile. 18 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12443g00007 435 Gene3D Transferase(Phosphotransferase) domain 1 3 344 - -
Mupr12443g00007 435 CDD STKc_CK1_delta_epsilon 17 285 - -
Mupr12443g00007 435 SUPERFAMILY Protein kinase-like (PK-like) 14 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12443g00007 Mupr-Chr12443 26104 33775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12443g00007 4 166 EF-hand Containing Proteins AT3G50530 29.143 9.43e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr12443g00007 Pkinase 1.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12443g00007 K08960 - gmx:100789031 790.03