Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12439g00002 ATGGCTTCCTCTTACCGTGACCGAACGTCGGAGTTCCGGTTACTGACGGAGACTCTGAAGAAAATCGGAGGAGGCGCGGCAGCTCCGATTCAAGCTGAGAATGCACCTTCCACCTCTCACGAGTCGTATTCGAGATCCGAATTCAACCGAAAGGCCTCGCGAATCGGGTTGGGGATCCACGAAACCTCGCAGAAGATCGCGAGGCTAGCTCAGCTAGCGAAAAAGTCGTCCATGTTCAACGATCCGATTGTGGAAATTCAGGAACTGACTGCTTTGATTAAGAACGAAATCACGGCGCTGAACTCGGCTCTCTCCGATTTGCAAACCATTCAGCACATGGATATGGCTGACGGAAATTACTCCCAGGATAGAGTTGTGCATTCGAACGCCGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACAAAGCACCTTCAAGATGTCTTAACTGCTAGGACTGAGAATATCAAGGCTCATGAGAACAGGAAGCAGATATTTTCCAAGAATGTATCAAGAGAGAACCCTTTCCAGCATCAGCCAAAGCCAGCTACTGAGCCACCACCTTGGTCAAATTCATCGAATGCATCTGAGAATTTGGAACAGGCATCCCTGTAA 618 0.4903 MASSYRDRTSEFRLLTETLKKIGGGAAAPIQAENAPSTSHESYSRSEFNRKASRIGLGIHETSQKIARLAQLAKKSSMFNDPIVEIQELTALIKNEITALNSALSDLQTIQHMDMADGNYSQDRVVHSNAVCDDLKSKLMGATKHLQDVLTARTENIKAHENRKQIFSKNVSRENPFQHQPKPATEPPPWSNSSNASENLEQASL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12439g00002 205 SUPERFAMILY t-snare proteins 44 170 IPR010989 GO:0016020|GO:0016192
Mupr12439g00002 205 MobiDBLite consensus disorder prediction 189 205 - -
Mupr12439g00002 205 MobiDBLite consensus disorder prediction 160 205 - -
Mupr12439g00002 205 Gene3D - 41 204 - -
Mupr12439g00002 205 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12439g00002 Mupr-Chr12439 8444 11055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12439g00002 1 182 SNARE and Associated Proteins AT5G05760 63.736 1.10e-76 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12439g00002 K08490 - gmx:100777383 345.125