Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12437g00001 ATGAGGCTGAGGGTGGTCTGGCCGCCAAGCCCACAAGTTCCTTTGACTCACGTGCCACCAATCAACCTCTTCTTTAAGTTGGGTCCCACTAACCACCACATGTTCCAAAAATTTAGTGCACCTGCAAGTGGCAATAGCAATGCATTCATCTTCAAAACCTACCTTCCACTTCACTATTCAGTATTCAAATCATCGATTTCCTTTCCCTCCCTATATAAAACAGAAATGAGTTCCTCGTTCTTTTCTGGAGACTTAAACTATGAAGTCCCTTACCAGTACTCCCTTCCTTTCAACGAAAATGACTCGGAGGAAATGCTCCTTTACCAAGTACTGGCACAGGGCGGTGGTGAAAATTCCTTGGAAACAACAACAACGGTGTCGTACAGAGGAGTTCGAAGGAGGCCGTGGGGCAAATTCGCGGCGGAGATAAGGGACTCAACGAGGAACGGAGTGAGGGTGTGGTTGGGAACCTTCGAGACCGCGGAGGCTGCTGCTTTGGCATACGACCAGGCTGCGTTGGCGATGAGAGGATCGATGGCTGTGTTGAATTTCCCAGCTGAGGTGGTTAGGCAATCACTTCGGAACATGGAGTGTGGTTTTGAGGAAGGCTGCTCTCCCGTTCTGGAGCTGAAGAAGAGGCACTCCATGAAGAGGAAATTGGAGAGCAAGAAAGTGAAAAACAAGTCCCAAAATGTCATGGTCTTCCAGGACTTAGGGGCAGACTATTTGGAACAACTTCTTACTCTGTCCCAGGATATGGATATGGATATGGATGCTTCTTATTAG 786 0.4809 MRLRVVWPPSPQVPLTHVPPINLFFKLGPTNHHMFQKFSAPASGNSNAFIFKTYLPLHYSVFKSSISFPSLYKTEMSSSFFSGDLNYEVPYQYSLPFNENDSEEMLLYQVLAQGGGENSLETTTTVSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFETAEAAALAYDQAALAMRGSMAVLNFPAEVVRQSLRNMECGFEEGCSPVLELKKRHSMKRKLESKKVKNKSQNVMVFQDLGADYLEQLLTLSQDMDMDMDASY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12437g00001 261 Gene3D AP2/ERF domain 127 187 IPR036955 GO:0003700|GO:0006355
Mupr12437g00001 261 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 PANTHER DNA-BINDING DOMAIN 109 252 IPR044808 GO:0003700|GO:0009873
Mupr12437g00001 261 Pfam AP2 domain 128 177 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 CDD AP2 128 186 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 FunFam Ethylene-responsive transcription factor 2 126 187 - -
Mupr12437g00001 261 ProSiteProfiles AP2/ERF domain profile. 127 185 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 SMART rav1_2 127 191 IPR001471 GO:0003700|GO:0006355
Mupr12437g00001 261 SUPERFAMILY DNA-binding domain 128 187 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12437g00001 Mupr-Chr12437 5082 5937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12437g00001 95 252 AP2-EREBP Transcription Factor Family AT3G23240 55.307 2.41e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr12437g00001 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12437g00001 K14516 - gmx:100787732 236.884