Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12432g00001 ATGGACGCATACTCCTCTGGCGAAGAAGTGGTTGTTAAGACGAGAAAACCGTATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAACTACACGGGCGAGCATGGCAGCGCATAGAAGGTGATAAGCATATAGGAACGAAGACTGCCGTGCAAATCAGAAGCCATGCACAGAAGTTCTTTACAAAGGTCAATGGGTACCTTCTCACCTTG 243 0.4568 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEGDKHIGTKTAVQIRSHAQKFFTKVNGYLLTL 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12432g00001 81 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Mupr12432g00001 81 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 73 IPR006447 GO:0003677
Mupr12432g00001 81 Gene3D - 26 74 - -
Mupr12432g00001 81 ProSiteProfiles SANT domain profile. 22 75 IPR017884 -
Mupr12432g00001 81 PANTHER SWI/SNF COMPLEX-RELATED 7 74 - -
Mupr12432g00001 81 SMART sant 23 73 IPR001005 -
Mupr12432g00001 81 SUPERFAMILY Homeodomain-like 18 75 IPR009057 -
Mupr12432g00001 81 CDD SANT 26 71 IPR001005 -
Mupr12432g00001 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Mupr12432g00001 81 Pfam Myb-like DNA-binding domain 24 69 IPR001005 -
Mupr12432g00001 81 FunFam protein REVEILLE 6 isoform X1 26 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12432g00001 Mupr-Chr12432 1876 2994 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12432g00001 Myb_DNA-binding 5.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12432g00001 K12133 - pvu:PHAVU_009G259600g 145.976